Pseudomonas cichorii: PCH70_30720
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Entry
PCH70_30720 CDS
T03002
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pci
Pseudomonas cichorii
Pathway
pci00020
Citrate cycle (TCA cycle)
pci00785
Lipoic acid metabolism
pci01100
Metabolic pathways
pci01110
Biosynthesis of secondary metabolites
pci01120
Microbial metabolism in diverse environments
pci01200
Carbon metabolism
pci01210
2-Oxocarboxylic acid metabolism
Module
pci_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pci_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PCH70_30720
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PCH70_30720
Enzymes [BR:
pci01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
PCH70_30720
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AHF68225
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All DBs
Position
complement(3654007..3656838)
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AA seq
943 aa
AA seq
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MQESVMQRMWNSAHLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPADGNSATDVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQVAQLDPLGLWQ
RPAPADLSINHYGLTNADLDTTFRAGDLFIGKEEASLREILEALQQTYCRTIGSEFTHIV
DSEQRNWFMQRLESVRGRPAFSAEIQGHLLERVTAAEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDELIQRSGSYGTKEVVIGMAHRGRLNVLVNTFGKNPRELFDEFEGKKKVELGSGD
VKYHQGFSSNVMTAGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDPDGDKVLPISL
HGDAAFAGQGVVMETFQMSQTRGFKTGGTIHIVINNQVGFTISNPLDSRSTEYATDVAKM
IQAPILHVNGDDPEAVVFVTQLAIDYRMQFKRDIVIDLVCYRRRGHNEADEPSGTQPLMY
QQITKQRTTRELYAEQLIKTGVLTEERVQAKIDDYRNALDNGQHVVKSLVKEPNKELFVD
WRPYLGHAWTARHDTRFDLKTLQELSAKLMELPEGFVVQRQVQKIYEDRQKMQAGGLPIN
WGYAETMAYATLAFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDASTYIPLKNLFAGQPRF
DLYDSFLSEEAVLAYEYGYSTTEPNALVIWEAQFGDFANGAQVVIDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNIQVCVPTTPAQIYHLLRRQVIRPLRKP
LIVLTPKSLLRHKLAISTLEELAEGSFQTVIPEVDALDPAKVTRLVLCGGKVYYDLLEKR
RAEGREDIAIVRIEQLYPFPEDDLMEAIAPYTNLQNVVWCQEEPMNQGAWYSSQHHLRRS
MSNHNRSLVLEYAGRDASAAPACGYASMHAEQQEKLLQDAFTV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtgatgcagcgcatgtggaacagtgcccacctttccggtggtaacgct
gcctatgtggaagagctttatgagctctacctgcacgaccctaacgctgtgccagaagaa
tggcgcacctactttcagaagttgccagcagacggcaactctgccaccgatgtatcgcat
tccacgattcgcgatcatttcgtgttgctggccaaaaaccagcgccgcgcccagccggta
tctgccggaagcgtgagcagcgagcacgagaagaagcaagttgaagtattgcgactgatc
caggcatatcgtatgcgcggccatcaggttgcccagctcgatccgctgggcctgtggcag
cgtcctgccccggccgatctgtcgatcaatcactacggcttgaccaatgccgatcttgat
acgactttccgtgccggcgacctgttcatcggcaaagaggaagcgagcctacgcgaaatt
ctcgaagcgttgcagcagacatattgtcgcaccatcggttcggagttcacgcacatcgtt
gattccgagcaacgcaactggttcatgcagcgtcttgaaagcgtgcgtggccgtcctgcg
ttctctgctgaaatccagggtcatctgcttgagcgtgttacggccgctgaaggtctggaa
aaatacctgggcaccaaatacccaggcaccaaacgctttggtctggaaggcggcgaaagc
ctgattccgatgctggacgagctgatccagcgctccggctcctacggcaccaaggaagtc
gtgatcggcatggcccaccgtggccgtctgaacgtgctggtcaacaccttcggcaagaac
ccgcgcgagctgttcgacgagttcgaaggcaagaagaaagtggagctgggctccggtgac
gtgaaatatcaccagggtttctcttccaacgtaatgaccgcaggcggtgaagttcacctg
gccatggcattcaacccgtcccacctggaaatcgtttctccggtggtcgagggttccgtg
cgtgcgcgtcaggatcgtcgcaacgatccggacggtgacaaggttctgccgatttccctc
cacggtgacgctgcgtttgcaggtcagggcgtggtcatggaaaccttccagatgtcgcag
acccgcggcttcaagactggcggcacgatccatatcgtcatcaacaaccaggttggtttc
accatcagcaacccgctggactcgcgctccaccgagtacgccaccgacgttgccaagatg
atccaggctccgattctccatgtgaatggcgatgacccggaagccgtggtgttcgtgacc
cagctggctatcgattaccgcatgcagttcaagcgtgacatcgtgatcgacctggtctgc
taccgtcgtcgcggtcacaacgaagcggacgagcctagcggcacccagccgttgatgtac
cagcagatcaccaagcagcgcacgactcgcgagttgtacgccgagcaactgatcaagacc
ggtgttctcactgaagagcgtgtgcaggccaagatcgacgactatcgcaatgcgctggac
aatggtcagcacgttgtgaaaagcctggtcaaggagccgaacaaggaactgttcgtcgac
tggcgtccgtacctgggccatgcctggactgcgcgtcacgacacccgtttcgatctcaag
accttgcaggaactgtctgccaagctgatggaactgccagaaggtttcgtcgttcagcgt
caggtccagaagatctacgaagaccgtcagaagatgcaagccggcggcctgccgatcaac
tggggttacgccgaaaccatggcgtacgcgaccctggcgttcgaaggtcacccgatccgc
atgacgggtcaggacatcggtcgcggtacgttctcgcaccgtcacgccgtcttgcacaac
cagaaagacgcaagcacctacattcctttgaagaacctgttcgccggtcagccgcgtttt
gacctgtacgactcgttcctctccgaggaagcggtactcgcttacgaatacggctactcg
accaccgagcctaacgctctggtcatctgggaagcccagttcggcgacttcgctaacggc
gcgcaagtggtcatcgaccagttcatcaccagtggcgagcacaagtggggccgtctgtgc
ggtctgaccatgctgttgcctcacggttatgaagggcaggggcctgagcactcgtccgca
cgtcttgagcgttacctgcaactgtgtgccgagcacaacattcaggtgtgtgtgccgact
acgccggcgcagatctaccacctgctgcgtcgtcaggtcattcgtccgctgcgcaagccg
ctgatcgtgctgacgccaaagtcgctgctgcgccacaaactggcgatctcgactctggaa
gaactggccgaaggctcgttccagaccgtgatcccggaagtcgatgcgctcgatccggcc
aaagtgacccgtctggttctgtgtggcggcaaggtctactacgacctgctggaaaaacgc
cgtgccgaaggccgagaagacatcgcaatcgtacgtatcgaacagctgtatccgttccct
gaagacgatctcatggaagcgatcgcgccttacaccaacctgcagaacgtagtgtggtgt
caggaagagccgatgaaccagggtgcctggtacagcagtcagcaccacttgcgtcgcagc
atgagcaaccataaccgcagcctcgttctcgagtatgccggtcgtgatgcttctgcagcg
ccagcttgtggttatgcttcgatgcatgccgagcagcaggaaaaactcctgcaagatgcc
ttcactgtttaa
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