Pseudomonas cichorii: PCH70_41170
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Entry
PCH70_41170 CDS
T03002
Name
(GenBank) RND family efflux transporter MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pci
Pseudomonas cichorii
Pathway
pci01501
beta-Lactam resistance
pci01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PCH70_41170
01503 Cationic antimicrobial peptide (CAMP) resistance
PCH70_41170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pci03036
]
PCH70_41170
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pci02000
]
PCH70_41170
01504 Antimicrobial resistance genes [BR:
pci01504
]
PCH70_41170
Chromosome and associated proteins [BR:
pci03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PCH70_41170
Transporters [BR:
pci02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PCH70_41170
Antimicrobial resistance genes [BR:
pci01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PCH70_41170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
DUF7490
Motif
Other DBs
NCBI-ProteinID:
AHF69270
LinkDB
All DBs
Position
4803371..4804531
Genome browser
AA seq
386 aa
AA seq
DB search
MQFKPAVTVLVTAVALATLLSGCSKKEEAAPPAQIPQVGVVTLKAQPYALTTELPGRTTA
FRVAEVRPQVNGIILKRLFTEGGDVKAGQQLYQIDPALYEATATSAQATLQSARSLADRY
KQLVNEQAVSRQEYDTAVASSQEAQAALQTAQINLRYTKVLAPISGRIGRSAVTEGALVS
SAQTEAMATIQQLDPIYVDVVQSSANMLKLRNDLESGKLQKAGDNAAKVKLTLEDSSAYP
LEGKLEFSEVSVDQGTGSVTLRAVFPNPEHRLLPGMFVHAQLQAGISAQAILAPQQGVTR
DQKGTPTALIVNKDNKVELRTLVANRTVGSEWLIEEGLNAGDRVITEGLQYVKPGAEVKV
AEATNVKGANPAPAPATEKAAGSKGE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcaagccagctgttaccgttctggtcactgccgtcgccctggcaacactgctc
agtggctgtagtaagaaggaagaggcggcgccgccggctcagatccctcaggtcggtgtc
gtcaccctcaaagcccagccttatgcactgaccacagagcttcctggccggaccaccgcc
ttccgtgtggccgaagtgcgcccacaggtcaacggcatcatcctcaagcgcctgttcact
gaaggtggcgatgtcaaagccggccagcagctgtatcagatcgaccctgcgctctatgaa
gcgaccgcgaccagcgcccaggcaaccttgcagtcggccagatccctggcggatcgctac
aagcaactggtcaacgaacaagcggtgagccgtcaggaatacgacacggccgtggcttcc
agccaggaagcccaggctgccttgcagaccgcccagatcaacctgcgctacaccaaggtg
ctggcgccgatctccggccgcatcggtcgttccgcagttaccgaaggcgcgctggtcagc
agtgcccagaccgaagccatggctaccatccagcaactcgacccgatctacgtcgacgtg
gtgcagtcctcggccaacatgctcaaactgcgtaacgacctcgagagcggcaaactacag
aaggcaggcgacaacgccgccaaggtcaagctgactctggaagactccagcgcttaccca
ctggaaggcaaactggagttctcggaagtctcggttgatcagggtacaggctccgtgacc
ctgcgcgctgtcttcccgaaccccgagcatcgtctgctgccaggcatgttcgttcacgcc
cagttgcaagcaggtatcagtgcccaggccatcctcgctccacaacagggtgtgacccgc
gaccagaaaggcactccgactgccctgatcgtgaacaaggacaacaaggtcgagctgcgt
accctggttgccaaccgcaccgtaggtagcgagtggctgatcgaagaaggcctgaacgcc
ggtgatcgtgtcatcaccgaaggcctgcagtacgtaaaaccgggcgcggaagtgaaagtc
gcagaagcaaccaacgtcaaaggagctaacccggcgcctgccccggccactgaaaaagcc
gctggcagcaaaggggagtaa
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