Psychrobacter cibarius: Q6344_13980
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Entry
Q6344_13980 CDS
T09259
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pcia
Psychrobacter cibarius
Pathway
pcia01501
beta-Lactam resistance
pcia01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcia00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Q6344_13980
01503 Cationic antimicrobial peptide (CAMP) resistance
Q6344_13980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcia02000
]
Q6344_13980
01504 Antimicrobial resistance genes [BR:
pcia01504
]
Q6344_13980
Transporters [BR:
pcia02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Q6344_13980
Antimicrobial resistance genes [BR:
pcia01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Q6344_13980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
Prominin
DUF7222
Motif
Other DBs
NCBI-ProteinID:
WLG13682
LinkDB
All DBs
Position
complement(3279485..3282586)
Genome browser
AA seq
1033 aa
AA seq
DB search
MSLNVSAYSIKNPLVAILLFILLTLGGIYGFMKMKVQQFPDIDLPAVVVTVTLPGAAPSQ
LENDIAKKIENKLTSIEGIKHIRTTLQTGAATMVTEFVLEKDIQEAVDDVRSAVGEVRGD
LPAAANDPIITKVSTAGFPVVTYSVASKNMNVEDLSWFVDDTVTKRLSDIPGVSTVSRIG
GLQREITVAADPITLSGLKLSITQLSNQITGIQQDSSGGEAEVGKTTQTIRVLGAVERAS
ELNDLQVAIPAGGTQALGRMAQITDGAADPSSIAKLDGQTVVAFNITRSRGASEVEVMEL
VDAELAKLSADVGNITIEKVYDRATPIAEDYQASLRMLIEGGLLAVVVVFLFLRNIRATI
VAAVALPLSVIPTFLGMYLFGFSLNIISLLALSLVIGVLVDDAIVEVENIIRHLRMGKTP
YEAAMEAADEIGLAVVATTFTLIAVFLPTAFMGGIVGQFFRQFGWTAALSIFASLMVARL
ITPMMAAYILRPEKKHVEKQSALMGWYLKIVAWTLHHRWLTMGATLVLFVASLMLVKLLP
TSFIPDNDIDQTRVAIELTPDVALEDTERVAALASERILAMPEVTNIFTSVGEAQASMDS
NSSGGKAENIAGLDIVLAPRAERSSKQEIERQISSLLAEVPGARFTVGLSSGGESGYNFS
MTSTNPQLLEQTAQQIMSEIRGLPSAGSVTSDRSLPRQELTVTPDRLAMADKGVTTQDIA
TTLRVATVGDYEQRLSKLNLDTRQIPIVIRLPDVAKQNVSQLEGLYVPSSLPAGQGVRVG
EVASLDFGTGPAQISRLDRERAISITVQPASGELGDLVQAVKSVPAMQQLPPSITIIDQG
QAENMAELFSGFVIAMSVGVVCILGVLILLFGRILQPFTILMALPLSIGGAFVGLVITNS
SLSMPSMIGFIMLMGIATKNSILLVDYALIAQRRGLARFEAIIDACRKRARPIIMTTIAM
GAGMLPLVFGWGDADPTFRRPMAAAVLGGLVTSTLLSLVVIPVVYTLMDDLSGWFAKWLV
PSGKEQTTTDSKV
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaaatgtttctgcttactcgataaaaaatcctttagttgccattttgctattt
atactactgacgttaggcggtatttatggctttatgaaaatgaaggtgcagcagtttcct
gatattgacctacctgcagttgtggtcacggtgactttaccgggtgccgcgccatcacag
ctcgaaaacgacatcgcaaaaaagatagaaaacaagctcaccagtattgagggtatcaag
catattcgcaccacgttacaaacgggtgctgccaccatggtcacagagtttgtgttagaa
aaggatattcaagaagcggtcgatgatgtgcgctcggcagtaggcgaggtacgcggcgat
ttgcctgccgcggccaatgaccctattattactaaagtttcaaccgcaggattccccgtt
gtcacttattctgtggcttctaaaaacatgaatgtggaagacttgtcttggttcgtcgat
gatacggtcaccaagcgtctttctgatataccgggtgtcagcacggttagccgtattggt
ggtttgcagcgtgagattaccgtcgcagctgacccgattaccttgagtggtcttaagctc
tctatcacacaactatccaatcaaatcacgggtattcagcaggacagctctggtggtgaa
gcagaagtgggcaaaaccacccagacgattcgtgtccttggtgcggtggagcgggcaagt
gagctcaatgatttacaagtggcaatcccagcaggtggtacgcaagcgcttggacgtatg
gcacaaatcacagatggcgcggctgacccaagctctattgctaagctcgacgggcaaacg
gtggtggcatttaacatcacccgctcgcgtggtgccagtgaagtcgaggtcatggagctg
gttgatgcagagcttgccaagctgtcagccgatgtagggaatatcactattgaaaaagtc
tatgatcgggcaacgcccatcgctgaagattatcaagcctcattacggatgctgatcgaa
ggtggtctgttagcagtcgtcgttgtattcttatttttgcgcaatattcgggcaactata
gttgctgctgtcgccttgccattatcagtgattcccacctttttaggtatgtacttattt
ggctttagcctcaatattatatctttgttggcattgtcgttagtgattggtgtattggtt
gatgatgcgatcgtcgaggtcgaaaacatcatacggcatttacgcatgggcaagacaccg
tatgaagcagcgatggaagcggctgacgagattggcttggcggtagtcgcgaccaccttt
actttgattgccgtgtttttacccaccgcctttatgggcggtatcgttggacagtttttc
cgtcagtttggctggacggctgcattgtcgatttttgcgtctttgatggtcgcgcgtctt
atcacaccgatgatggcagcgtatatattgcgaccagagaaaaaacacgttgagaaacaa
agcgcgctgatgggttggtatctcaaaatagtggcatggacactgcatcatcgctggctg
acgatgggtgcaactttagtgttattcgtggcgtcactgatgcttgtcaaattactacca
acatcgtttattcctgataatgacattgaccaaactcgtgtggcgattgagttgacacct
gacgttgcgctggaagacacagagcgcgttgctgcgctggcaagtgagcgtattttagca
atgcctgaagtcaccaatatttttacctcagtcggtgaggctcaggctagcatggactca
aactctagtggtggcaaagccgaaaatatagcaggtctagacatcgtgctagcaccacgt
gcagagcgcagctctaagcaagagattgaacgtcaaataagtagtttgttggcagaagtg
ccaggtgcgcgctttaccgtcggtttgtcgagtggtggagagagtggttacaacttctct
atgaccagtactaatccgcaattgcttgaacaaaccgctcagcaaatcatgtcagagatt
cgagggctacccagtgctggctccgtgaccagtgaccgcagtttgccgcgtcaagagtta
acggtgacgccagacagactggcgatggcggataaaggtgtgaccacgcaagacatcgct
acgacgttacgagtggcgacggtgggtgactatgagcagcgtttatccaagctcaatttg
gatacgcggcagattcctatcgtcattcgtttaccagatgttgccaaacaaaatgtcagt
caattagaaggtctatatgtaccgagctcgttaccagcaggacagggtgtacgtgtgggt
gaagtcgcgtcattagactttggcactgggcctgcgcagattagcaggctcgatcgggaa
cgcgccatcagtatcacggtgcaacctgcgagtggcgagcttggagatttggtacaagcg
gttaaatcagtacctgccatgcaacaactaccgccttccattaccattattgaccaaggt
caagcagaaaacatggctgagctattcagcggttttgtgattgcgatgtcggtcggtgtg
gtttgtattttaggcgtacttattctattgtttgggcgtatattgcagccttttaccatt
ttgatggcattgcctttatcgataggcggcgcttttgtaggcttggttattaccaatagc
agtctttctatgccgtcgatgattggctttattatgctaatgggtattgccaccaaaaac
tctatcttactggtcgattatgcactgattgcacagcgtcgaggtttggcgcgttttgag
gctattatcgatgcttgccgcaagcgggcgcgtcctattattatgactactattgcgatg
ggggcaggtatgttgcccttagtcttcggttggggtgatgctgatccaaccttccgtcgt
ccgatggctgctgcggtactgggtggtctggtgacttcgacgttattaagccttgtggtg
attcccgtggtttatactttgatggatgatttgtcaggatggtttgctaaatggctcgta
cctagtggcaaagagcagacaacaacagatagtaaagtatga
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