Prosopis cineraria: 129296059
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Entry
129296059 CDS
T09047
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
pcin
Prosopis cineraria
Pathway
pcin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129296059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129296059
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129296059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ORC-CDC6-like
nSTAND3
AAA_29
NACHT
AAA_24
AAA_28
AAA_22
AAA
AAA_15
AAA_23
AAA_30
AAA_18
AAA_25
SRP54
SMC_N
Zeta_toxin
AAA_14
PduV-EutP
AAA_5
AAA_16
AAA_33
Arf
nSTAND_NTPase5
AAA_7
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
129296059
NCBI-ProteinID:
XP_054790632
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MSLIIMADDEGTRRQRFEYKDEDDNESCRGIRVCGMQFAYDGQPPLFVDFNLKISTGSRC
LLVGANGSGKTTLLKILAGKHMVGGRDVVRVLNCSAFHDTRLVCSGDLSYLGGSWSKSVG
SAGEIPLQGDFSAEHMIFGVEGTDPERRAKLIELLDIDLQWRMHKVSDGQRRRVQICMGL
LHPYKVLLLDEVTVDLDVVTRMDLLDFFGEECEQRGATIVYATHIFDGLETWATHLAYIQ
DGELRRAEKLSDISELSCSSNLLSVVESWLRAETKLEKKNPVNPPSGIQKTSFGSSPFIS
SRHMAYYR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcatcataatggccgacgacgaaggaactcggaggcagagattcgaatataag
gacgaagatgacaatgaaagctgcagaggaattagagtgtgtggtatgcaattcgcctac
gatgggcaaccaccactcttcgtcgacttcaaccttaagatctctactggatcgcgatgc
cttctagttggtgccaatggatccgggaagaccactttgctgaaaattctggctggcaag
catatggtcggaggaagagatgttgtaagggtgttaaattgttccgcttttcacgatact
cgactggtttgcagtggtgatctctcctatttgggaggatcctggagtaaatccgttggt
tcagcaggagaaattccactgcagggagacttttcagctgaacatatgatatttggagtt
gagggcacagatcctgaaaggagagctaagttgattgagcttcttgatatagatctacag
tggcgaatgcataaggtatcagatgggcagcgacgccgagtgcaaatttgcatgggtctt
cttcatccatacaaggttctcttgctggatgaggttactgtggacttggatgttgttact
aggatggatttgctggacttcttcggggaagaatgtgagcagagaggagctacaattgta
tatgcaactcatatctttgatggacttgagacatgggccactcatctagcatacatacaa
gatggtgaactcaggagggcggaaaagttatcggatattagtgagttgagttgctcgtct
aatcttctttctgttgttgagtcatggctccgtgctgaaacaaagcttgaaaagaagaac
cctgtaaaccctccttccggcatccaaaagacttcttttggcagttctccttttatttcc
tcaagacacatggcatattaccggtag
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