Prosopis cineraria: 129300414
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Entry
129300414 CDS
T09047
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
pcin
Prosopis cineraria
Pathway
pcin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129300414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129300414
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129300414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ORC-CDC6-like
AAA_29
NACHT
nSTAND3
AAA_28
AAA
AAA_15
AAA_22
AAA_23
AAA_24
AAA_18
AAA_25
PduV-EutP
AAA_30
SRP54
Arf
AAA_33
AAA_16
ATP-synt_ab
AAA_14
Zeta_toxin
AAA_5
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
129300414
NCBI-ProteinID:
XP_054794954
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MSLIIMADDEGTRRQRFEYKDEDDNESCRGIRVCGMQFAYDGQPPLFVDFNLKISTGSRC
LLVGANGSGKTTLLKILAGKHMVGGGRDVVRVLNCSAFHDTRLVCSGDLSYLGGSWSKSV
GSAGEIPLQGDFSAEHMIFGVEGTDPERRAKLIELLDIDLQWRMHKVSDGQRRRVQICMG
LLHPYKVLLLDEVTVDLDVVTRMDLLDFFGEECEQRGATIVYATHIFDGLETWATHLAYI
QDGELRRAEKLSDISELSCSSNLLSVVESWLRAETKLEKKNPVNPPSGIQKTSFGSSPFI
SSRHMAYYR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcatcataatggccgacgacgaaggaactcggaggcagagattcgaatataag
gacgaagatgacaatgaaagctgcagaggaattagagtgtgtggtatgcaattcgcctac
gatgggcaaccaccactcttcgtcgacttcaaccttaagatctctactggatcgcgatgc
cttctagttggtgccaatggatccgggaagaccactttgctgaaaattctggctggcaag
catatggtcggaggaggaagagatgttgtaagggtgttaaattgttccgcttttcacgat
actcgactggtttgcagtggtgatctctcctatttgggaggatcctggagtaaatccgtt
ggttcagcaggagaaattccactgcagggagacttttcagctgaacatatgatatttgga
gttgagggcacagatcctgaaaggagagctaagttgattgagcttcttgatatagatcta
cagtggcgaatgcataaggtatcagatgggcagcgacgccgagtgcaaatttgcatgggt
cttcttcatccatacaaggttctcttgctggatgaggttactgtggacctggatgttgtt
actaggatggatttgctggacttcttcggggaagaatgtgagcagagaggagctacaatt
gtatatgcaactcatatctttgatggacttgagacatgggccactcatctagcatacata
caagatggtgaactcaggagggcggaaaagttatcggatattagtgagttgagttgctcg
tctaatcttctttctgttgttgagtcatggctccgtgctgaaacaaagcttgaaaagaag
aaccctgtaaaccctccttccggcatccaaaagacttcttttggcagttctccttttatt
tcctcaagacacatggcatattaccggtag
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