Prosopis cineraria: 129313065
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Entry
129313065 CDS
T09047
Name
(RefSeq) ATP-dependent helicase rhp16-like isoform X1
KO
K15083
DNA repair protein RAD16
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129313065
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
129313065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_UBOX
ResIII
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
Prok-RING_4
zf-Nse
FAD_binding_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
129313065
NCBI-ProteinID:
XP_054811875
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MELRPRNRLSTPNIDAAMNEQQPNDASGEAKTASHCSNNANEVSSGSHSSFEDDEALNSS
LDLNKEPTSSFCASDGVDDTSDSSNSWDSPYRKIRGKKRRKRSSKNGESNQDKGVLQYGD
NDGSTRVQQQSTDDHLGSLGKKKKRKRARKDPQPVLLWKVWEEQHERWIDENLSVDVDLD
HHNELMKETAEPSSDLTMPLLRYQKEWLAWALKQENSKIRGGILADEMGMGKTIQAISLV
LAKREIRQMVCESDETSSLPSSSTVLPGIKGTLVVCPLVAVTQWVSEIDRFTLKGSTKVL
IYHGANRGKCREEFSEYDFVITTYSIVESEYRKHMMPPKEKCPYCGKSYSHSKLSFHQRY
YCGPDAERTEKQSKQLKKKQRKVDTKKNVQMKMGPDNSDTTGKGKSLLHAVKWQRIILDE
AHYIKSRQCNTAKAILALESSYRWALSGTPLQNRVGELYSLIRFLQVVPYSYYLCKDCDC
RILDHSSKECSNCQHSSVRHFCWWNKYVATPIQLYGNSDAGRRAMILLTHKVLKNIILRR
TKIGRAADLALPPRIVSLRKDSLDIKEQDYYESLYNESQAQFNTYVESNTLTNNYAHIFD
LLTRLRQAVDHPYLVVYSQAASLKAGVEVSNDNVEQVCGLCHEPVEDPVVTSCEHIFCKA
CLIDFSASLGQVSCPSCSKLLTVDLTSNIDVGDQSRKTTIKGFRSSSILNRIRLENFQTS
TKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLLKSGVSCVQLNGSMSLTARDA
AIKRFTDDPECKIFLMSLKAGGVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKP
IRIVRFVIENTIEERILKLQEKKELIFEGTVGGSAEALGKLTEADMRFLFIT
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgtcctcgtaatcgactttctactcctaatattgatgcagcaatgaatgaa
caacagcccaatgatgcctctggagaagctaaaactgctagccattgtagcaataatgca
aatgaagtctcttcaggttcacattccagtttcgaagatgatgaagctttgaactcctct
cttgacttaaataaagaacctacttcaagcttttgcgcttctgatggggtagacgacacc
tctgattcatccaatagctgggatagtccgtatagaaagataagaggaaagaaaagaaga
aaacgtagctcaaaaaatggagagtccaatcaggacaagggagtgttgcagtatggagac
aatgatggctccacaagagttcagcagcaatcaactgacgatcatttgggtagccttgga
aagaagaagaaaagaaaaagagcaagaaaagatccgcagccagtgttgttatggaaggta
tgggaagagcagcatgagagatggatcgatgagaatttatctgtagatgttgacttggat
catcataatgaactaatgaaagaaactgccgagccttcctctgaccttactatgccttta
ctaagataccaaaaggaatggctagcatgggctcttaaacaagagaattctaaaattagg
gggggtattcttgcagatgaaatggggatgggaaagactattcaagcaatttctcttgtc
cttgccaaacgtgaaatccggcaaatggtttgtgaatcagatgaaacatcctctttgcca
agttcatctacagtcttgcctgggatcaaaggaacgcttgtagtttgtcctttggttgct
gtcactcagtgggttagtgagattgataggtttactctgaaaggaagcaccaaggtgcta
atttatcatggggccaatagagggaagtgtagggaagagttctcggagtatgattttgta
ataactacatactctattgttgaatcagaatacaggaagcatatgatgcctcctaaggag
aagtgcccatattgtggcaaatcttatagccactcaaagttatcttttcaccagagatat
tattgtgggcctgatgctgagagaacagaaaaacaatcgaagcaattgaagaaaaagcaa
agaaaagttgatacaaaaaaaaatgttcagatgaaaatgggcccagataattcagatacc
acaggcaaggggaagtcacttttacatgctgtaaagtggcagcggatcattttggatgag
gcacactatataaaatctagacaatgtaacactgcaaaagcaattcttgctcttgagtct
tcctatagatgggcattaagtggaactccccttcagaatcgtgtgggagagctgtattct
ctgatacgtttcctgcaagtagttccttattcctattacttgtgtaaggactgtgattgc
aggattcttgatcatagttctaaggaatgttcaaactgccagcacagttctgttagacat
ttctgttggtggaataaatatgtagccacaccaattcaattatatggaaacagtgatgct
ggaaggagagcaatgatattgcttacgcacaaggttttaaaaaatataatattaagacgt
actaaaataggccgggctgctgatctcgcacttccaccaagaattgtgtcgttgagaaag
gacagcctggatataaaagagcaagactattatgaatcattatacaatgaaagtcaggca
cagtttaatacgtatgtggaatcaaataccttgacgaataactatgctcatatatttgac
ctcctcaccaggcttcgacaggctgttgatcatccataccttgtggtatattctcaagct
gcatcattgaaagctggggttgaggttagcaatgacaatgttgaacaagtatgtggcctt
tgtcatgagccggtagaagatcctgtggttacctcatgtgaacacatcttttgtaaggca
tgcttgatagacttctctgcttccttggggcaagtgtcatgcccttcatgctccaaatta
cttactgttgatttaacttccaatattgatgttggggatcagtctagaaaaacaacaata
aagggtttcagatcctcaagcattttaaatagaattcggcttgagaactttcagacaagt
actaaaatagaggcattgagagaagaaattagatttatggtagaaagggatggctctgca
aaagggattgtttttagccagttcacttcattcttggatctcataaactactcccttctt
aagtctggcgtgtcttgcgttcaattgaatggaagcatgtcattaactgcccgggatgct
gcgattaagagatttactgatgatccagaatgcaaaatttttctcatgagcttgaaagct
ggtggcgttgccctcaatttgaccgtagcatcacatgttttcattatggacccttggtgg
aacccagccgtggagcgtcaggctcaagatagaattcaccgaatagggcaatataaacca
atcagaattgtcaggtttgtaattgaaaacactattgaggagaggattttgaagctgcaa
gagaagaaggagctaatttttgaagggactgttggcggctccgccgaagctctgggcaaa
ctcacggaggcggacatgagatttctgtttattacctga
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