Prosopis cineraria: 129320655
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Entry
129320655 CDS
T09047
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129320655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129320655
Spliceosome [BR:
pcin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129320655
Complex C
U5 SnRNP specific factors
129320655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFL1
EFG_III
MMR_HSR1
EF-G_D2
Roc
Septin
SOI
Ras
Motif
Other DBs
NCBI-GeneID:
129320655
NCBI-ProteinID:
XP_054822173
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MDDSLYDEFGNYIGPEIESDQESDREDEDEELPDRPTEDEAASDGEDEPGATNGWITTSN
DVDMDNQVVLAEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRNIKFEVGVKDS
STYVSSQFLLGLMSNPTLVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFDSHREKHMRYT
DTRIDEQERKISIKAVPMSLVLEDSIAKSYLCNIMDTPGHVNFSDEMTAALRLADGAVLI
VDAAEGVMVNTERAIRHAIQDRLPIVVVINKVDRLITELKLPPKDAYHKIRHTLEVINNH
MSAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYGKLHGIPLDANKFASRLWG
DFYYHPDTRTFRKKPPTSGGERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGVTLSN
AAYRLNVRPLLRLACSSVFGPATGFTDMLVQHIPSPKEAAIRKVDHIYTGPKDSTIYRAM
AQCDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQSVRVLGEGYSPDDEEDMTVK
EVTKLWVYQARDRMPIAEAPPGSWVLIEGVDASIMKTATLCNVDYDEDVYIFRPLQFNTL
SVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTVLGTGELYLDSIMKDLR
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV
STDWNRKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKNLLNAVKDS
IVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLMATP
RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFET
DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
DVSISKFFDEAMMVELAQQAADLHQQMI
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagcttgtatgatgagttcggaaactatatcggcccagaaattgagtcggac
caagaaagtgacagagaagatgaagatgaagagcttccagacagacccaccgaggatgaa
gcagcatctgacggtgaggatgaacctggtgccaccaatggctggattaccacctccaat
gacgttgatatggataatcaggttgttcttgctgaggacaagaagtactatcccactgca
gaggaggtttatggggaagatgttgaaactctggtcatggatgaggacgagcagcctctt
gagcaaccaattattaagcctgttaggaatataaagtttgaggttggagtgaaggattcg
tctacctatgtttcttctcagttccttcttggcctcatgtctaatcctacccttgttagg
aatgttgcacttgtgggacacttgcaacatgggaagactgtgtttatggatatgttggtg
gagcagacccatcatatgtctacctttgattcacatagagagaaacacatgaggtataca
gacactaggattgatgaacaagaaagaaagatatcaatcaaagctgttcctatgtcactt
gtactcgaggacagcattgcaaagtcatatttgtgtaacattatggacacccctggtcat
gtcaatttttctgacgaaatgactgccgcgctaaggcttgcagatggtgcggtgttgatt
gtggatgccgctgaaggagttatggtcaacacagagagggccatacgtcatgccatccaa
gatcgcctgcctattgttgttgtcatcaataaggttgacaggctaataactgaacttaaa
ttgcccccaaaagatgcttatcataaaatcaggcatactttggaagtgatcaacaatcac
atgtctgctgcttcttcaactgctggcaatgtacaagttatagatccagctgctggaaat
gtttgttttgcaagtgctactgctggatggtcttttactctgcagtcatttgctaaacta
tatgggaagctgcatggaattcctctggatgctaataaatttgcttctcgtctttggggg
gatttttattatcatccagataccagaactttcagaaagaaaccacctactagtggaggg
gaacgatcttttgtagagtttgtgcttgaacccctttacaagatatatagccaggtgatt
ggagaacataaaaagagtgtggagacaactcttgcagaacttggagttactctaagcaat
gcagcctatagattaaatgtcagacctttgctgaggctagcctgcagttcagtttttggt
ccagccactggttttactgatatgcttgttcagcatataccttcaccaaaagaggctgca
atcaggaaggttgatcatatatatactgggccaaaagattctaccatttacagggccatg
gcacagtgtgatccttctgggcccctaatggttaatgtgactaaactgtatccaaagtct
gattgtagcgtgtttgatgccttcggtagagtttatagtggcaagatacaaacagggcag
agtgtacgcgttctgggagaaggctactcaccagatgatgaggaggatatgactgttaaa
gaagtaacaaaattatgggtgtatcaagctcgagataggatgccaatagctgaggctcct
cctggttcctgggttcttattgaaggtgtagatgcttcgatcatgaaaactgccactctt
tgtaatgtggattatgatgaagatgtatatatattcagaccacttcagttcaatactctg
tcagtggtgaaaacagctaccgagccattaaatccaagtgaattgccaaaaatggtggag
ggcctgagaaaaatcagtaagagttatcccttagcagttactaaagttgaggagtctggg
gaacacactgtgttaggcactggtgagctctacttggattcaattatgaaggacctgaga
gagttgtattctgaagtagaagtcaaggttgctgatcctgttgtctcattctgtgaaact
gtcgttgaatcttcatcaatgaaatgttttgctgaaactcctaacaagaagaataaaata
actatgattgcagagcccttggaaagaggtcttgctgaagacatagagaatggagttgtt
agtactgactggaacagaaaaaagctaggtgaattttttcagacaaagtacgactgggat
ctcctagctgcacggtcaatctgggcatttggccctgacaagcagggtcccaatatcctc
ttagatgacacacttcctactgaagttgacaagaacctactaaatgctgtgaaggattcc
attgttcagggatttcaatggggtgcacgagagggacctttgtgtgatgagcctattaga
aatgttaagtttaagatagttgatgcaagaattgcccctgaaccactccatcgtggatct
ggccagatcattccaacagcaagacgagtggcctattcatctttccttatggccacacct
aggcttatggaacctgtatactatgtggagatccaaacaccgatagactgtgtttctgca
atctacacagtgctatcccgcagacgtggacatgtcacagctgatgttcctcaaccaggc
acaccagcttatattgtcaaggcatttttgcccgtcatagagtcttttggatttgagaca
gatttgagataccacacacaaggtcaagcattttgcctctcagtttttgatcattgggct
attgttcctggagaccctctggacaagagcattgttttacgtccacttgaaccagcacca
atccagcatcttgcccgtgagtttatggtgaaaacaaggcgtagaaagggaatgagtgag
gatgttagcatcagcaaattctttgatgaggctatgatggtggaactggcacagcaggct
gcagatcttcatcaacaaatgatatga
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