KEGG   Candidatus Pantoea carbekii US: BMSBPS_0266
Entry
BMSBPS_0266       CDS       T03853                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
pck  Candidatus Pantoea carbekii US
Pathway
pck03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pck00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BMSBPS_0266
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pck03400]
    BMSBPS_0266
Enzymes [BR:pck01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BMSBPS_0266
DNA repair and recombination proteins [BR:pck03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BMSBPS_0266
 Prokaryotic type
     BMSBPS_0266
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5
Other DBs
NCBI-ProteinID: AKC32081
UniProt: U3U815
LinkDB
Position
complement(391027..391653)
AA seq 208 aa
MNKNKRIQILMRLQNKHNHPVIELNFQSPFELLIAVLLSAKSTDARVNKATDKLYRVANT
PETILALGTEELKKYIKSLGLFNRKSENITKLCYILLEKYAGNVPEDRTALQALPGVGRK
TANVVLNIAFGWRTIAVDTHIFRVSNRTGFALGKNVKEVEEKLLKVVPRRFQIYCHSWLI
LHGRYTCIARKPHCHNCVIQDLCEYEKN
NT seq 627 nt   +upstreamnt  +downstreamnt
gtgaataaaaataaacgaatacaaattttgatgcgattacaaaacaagcataatcatccc
gttattgaattgaattttcaatcgccgtttgaacttttaattgctgtattattatcagcc
aaatctacagatgcaagagttaataaagccacagacaaactctatcgagtggccaataca
cctgaaacaatattagctcttggaactgaagaactgaaaaaatatattaaaagtttaggt
ctatttaatagaaaatcagaaaatataaccaaattatgctatattttgcttgaaaagtac
gctggcaacgttccggaagatcgtacagcattacaagctttaccaggtgtaggacgtaaa
actgctaatgttgtgcttaacatagcttttggatggcgaactattgctgttgatacccac
atttttagagttagtaatcgtactggttttgcattaggtaaaaatgtaaaagaagtagaa
gaaaaactgttaaaagtagtccctagaagatttcagatatattgtcatagttggctaatt
ttacatggccgctatacttgtatagcacgaaaaccacattgtcataattgtgtcatacaa
gatctatgcgaatatgaaaaaaactaa

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