Candidatus Pantoea carbekii US: BMSBPS_0384
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Entry
BMSBPS_0384 CDS
T03853
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component SucA
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pck
Candidatus Pantoea carbekii US
Pathway
pck00020
Citrate cycle (TCA cycle)
pck00785
Lipoic acid metabolism
pck01100
Metabolic pathways
pck01110
Biosynthesis of secondary metabolites
pck01120
Microbial metabolism in diverse environments
pck01200
Carbon metabolism
pck01210
2-Oxocarboxylic acid metabolism
Module
pck_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pck_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pck00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BMSBPS_0384
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BMSBPS_0384
Enzymes [BR:
pck01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
BMSBPS_0384
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AKC32191
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All DBs
Position
complement(542435..545245)
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AA seq
936 aa
AA seq
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MQNSAMKFWLDSSWLAGANQSYIEQLYEEFLTDPESVDTVWRVIFQQLAAASVKPEVFHS
TMREYFRRLAKNTTYCSSRIINPIINFKQVKVLQLINAFRLRGHENAKLDPLCLSKQETI
LALNPAYYDLDQNDFQTSFSVGSFAIPKETMKLDDLYALLKKVYCGYIGVEYMHINNIEE
KHWIQRRIESEMNHISFSNEQKKTFLKELTAAEGLEKYLAAKFPGAKRFSLEGGDALIPM
LRAIIHYAGQNGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFSGNNKECMGTGDVKYH
MGFSSDIETCYGLVHMVLAFNPSHLEIVSPVVMGSVRARLDRLIGDNTTNEVLPITIHGD
AAVIGQGVVQETLNMSQARGYEVGGTIRIVINNQIGFTTSNLKDIRSTLYCTDIGKMVLA
PIFHVNADHPESVVFITRLALEYRNTFKRDIFIDLVCYRRHGHNEADEPTATQPMMYEKI
RKHPTPRIIYADQLVKEGIVTLHDTIEMVNLYRTGLDRGECVVPEWRSTKLQSRTWSPYL
NHDWNEHYEAKLQLQHLQELALRISYVPESVEMQLRVAKIYKDRQEMAKGEKLFDWGGAE
NLAYASLVDQGISIRLSGEDSSRGTFFHRHAVIHDQKNGKTYTPLHHVHSAQGQFKVWDS
MLSEEAVLAFEYGYATTEPRVLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVML
LPHGYEGQGPEHSSARLERYLQLCAQQNIQVCIPSTPAQIYHILRRQVLRRMRRPLIVMS
PKSLLRHPLAVSSLEELASSTFQPAIGEVDSLNPKEVKRVVLCSGKVYYDLLKERRKNKQ
INIAIVRIEQLYPFPHKAIKEILKNYCHVQDFFWCQEEPLNQGAWYCSQHHFREVLPVGA
SLRYAGRQASASPAVGYMSVHQKQQQDLVNSALKLD
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacagcgcgatgaaattctggctggactcctcctggctagctggcgcgaatcaa
tcttacatagagcaactctatgaagaatttctcaccgatcctgaatctgttgatacagta
tggcgtgtgatattccaacaacttgctgctgctagtgtaaaacctgaagtgtttcattct
accatgcgtgagtactttcgtcgattggctaaaaacacaacatactgctcttctagaatt
attaacccaataattaatttcaaacaagttaaagtattacaactaattaatgcatttcgt
ctacgtggtcatgaaaatgctaagcttgatccattgtgtctttcgaagcaagagaccata
ttagctcttaatccggcttattacgatttagatcaaaatgattttcaaacaagctttagc
gttggttcttttgccattcctaaagaaactatgaagctggatgatctttatgcattactg
aaaaaagtttattgtggttacatcggtgtagagtacatgcacattaataatattgaagaa
aaacattggatccagcgtcgaattgaatcagaaatgaatcatattagtttcagtaacgag
caaaaaaaaacttttttaaaagaactgactgctgcagaaggtttagaaaaatatcttgcc
gcaaaattccctggtgcaaaacgtttttctttagaaggtggggatgcattaatccctatg
ttacgtgcaataattcattacgctggtcaaaatggtacacgtgaagtagtactaggtatg
gcacatcgaggtcgcctgaacgtattagtaaatgtattaggtaaaaaacctcaagattta
tttgatgaattttctggtaacaataaagagtgcatgggtacaggtgacgtaaaatatcac
atgggtttctcttcagatattgaaacttgttatggtttagtacatatggtactagctttc
aatccttctcatcttgaaattgttagcccggtggtaatgggatcagtacgagcccgtttg
gatcgtttaataggagataacaccactaatgaagtgcttcctattactattcatggagat
gctgcggtaattggtcaaggtgtagtccaagaaacactaaatatgtcacaagctcgcggt
tacgaagttggtggtactatacgtatcgttattaataaccagatcggctttactacttct
aatttaaaagatattcgttcaacactctactgtaccgatattggcaaaatggtcttagca
cctatttttcatgttaatgctgatcatccggaatcagttgtttttattactcgtctagca
ttggaataccgtaatacttttaaacgcgatatttttattgatctagtatgttaccgtcgt
cacggtcataacgaagctgatgagccaactgctacacaaccgatgatgtatgaaaaaatt
agaaaacatccaacacctcgaataatctatgccgatcaattagtaaaagaaggtattgta
acacttcatgatactattgaaatggttaacctttatcgtaccggattagatagaggtgaa
tgcgtagtacctgagtggcgttcaacgaaacttcaatctcgtacttggtcgccgtatctg
aatcacgattggaatgagcactatgaggcaaagcttcaactacagcacttacaagaacta
gcattgcgaataagttatgtaccagagtcggttgaaatgcaattacgtgttgctaaaatt
tataaagatcgtcaagaaatggcaaaaggtgaaaaattatttgactggggaggcgcagaa
aacctagcttatgctagcttagtagatcaaggtattagtattcgtttatctggtgaagac
tctagtcgtggcacatttttccatcgtcacgcagtaatccatgatcagaaaaatggtaaa
acctatacaccattacatcatgttcatagtgcacagggtcaatttaaagtatgggattcc
atgttatcggaagaagcagtgctagcatttgaatatggttatgcaacgacagaaccacga
gtactgactatttgggaggcgcaatttggtgactttgctaatggagcacaggtagtaatt
gatcaatttattagttctggtgaacagaaatggggacgcatgtgtggactagtgatgtta
ttgccacatggttatgaaggacagggaccagaacattcttcggctcgtttagaacgttat
ttgcaactgtgcgcacaacagaatatacaggtctgtataccatctactccagcacaaata
tatcatattttacgtcgacaagtactgcgtagaatgcgtcgcccattaattgttatgtcg
ccaaaatcgttgttgcgccatccattagcagtttcttctttagaagagttagcaagtagt
acgtttcaaccggctattggtgaggtggatagtttaaatccaaaagaagtcaaacgtgta
gttttatgctctggtaaagtttactatgatctattaaaagaacgtcgtaaaaataagcaa
atcaatattgctattgtacgtattgaacaactttatccatttccgcataaggcaataaaa
gaaattttaaaaaactattgtcatgttcaggatttcttttggtgtcaagaagaaccactg
aatcaaggggcatggtactgtagtcagcatcatttccgtgaggtgctgccagttggtgca
tcactgcgttacgcaggtcgtcaggcttctgcttcaccagcggttgggtacatgtccgta
catcaaaaacagcagcaagacttggttaatagtgcgctgaagcttgattaa
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