Candidatus Pantoea carbekii US: BMSBPS_0628
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Entry
BMSBPS_0628 CDS
T03853
Name
(GenBank) organic radical Activating YgcF
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
pck
Candidatus Pantoea carbekii US
Pathway
pck00790
Folate biosynthesis
pck01100
Metabolic pathways
Module
pck_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
pck00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
BMSBPS_0628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pck03016
]
BMSBPS_0628
Enzymes [BR:
pck01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
BMSBPS_0628
Transfer RNA biogenesis [BR:
pck03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
BMSBPS_0628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AKC32411
UniProt:
U3U201
LinkDB
All DBs
Position
888660..889331
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AA seq
223 aa
AA seq
DB search
MFYPINEIFQTLQGEGFYTGVPSLFIRLQGCPICCTWCDTKYTWKKLINRNNSLNAILLK
KVKNDTWSNADLVTLIDTIQKKGWTARHVVITGGEPAIYDLYPLTHALEGLGFHCQIETS
GTHKLKCSHNTWVTVSPKVNMHNGYPVLDQTLQRADEIKYPVLNAQDLEVLKKLLLRLGD
SKKRIIALQPISLDETATKLCIKTCIDRNWLFSIQMHKYINIS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcctattaacgaaatattccagactttacaaggagagggtttttacactggt
gttccgtcattatttattcgtttacaaggatgcccaatatgttgtacctggtgtgataca
aaatatacttggaaaaaattgattaatcgaaataattcattaaatgctattttattaaaa
aaagttaaaaacgatacttggagtaatgctgatttagttacattgattgatacaattcag
aagaaaggttggacggcacgtcatgtagttattacaggtggtgaaccagctatctacgat
ttatatcctttaactcatgctttagaaggattaggctttcattgtcagattgaaactagt
ggaacacataaattaaaatgttcacataatacatgggtaacagtttcgcctaaagtaaat
atgcataacgggtatccagtattagatcaaaccttacagcgtgcagatgaaatcaaatat
ccagtattaaatgctcaagatcttgaagtattaaaaaagttattattaagattaggagat
agtaagaaacgtattatagcattacagccgatcagtctggatgaaacagcaactaaacta
tgtattaaaacttgcattgatcgtaactggctgttttcaattcaaatgcataagtatatt
aatatcagttaa
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