Procambarus clarkii (red swamp crayfish): 123747434
Help
Entry
123747434 CDS
T07930
Name
(RefSeq) F-box/WD repeat-containing protein 7
KO
K10260
F-box and WD-40 domain protein 7
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123747434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123747434
04121 Ubiquitin system [BR:
pcla04121
]
123747434
Membrane trafficking [BR:
pcla04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
123747434
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123747434
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_C
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_2nd
DSE1_N
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
F-box-like
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_DCAF12
F-box
ASA1
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_RIG_2nd
PAC11
Beta-prop_NOL10_N
WD40_like
TRM82_WD
Beta-prop_ACSF4
CFAP251_N
Beta-prop_Vps41
WD40_2
KNTC1_N
SHKBP1_KCTD3_C
DUF4508
Beta-prop_IFT140_2nd
F-box_5
DUF5342
F-box_COS111
Motif
Other DBs
NCBI-GeneID:
123747434
NCBI-ProteinID:
XP_045585615
LinkDB
All DBs
Position
94:13448688..13483531
Genome browser
AA seq
553 aa
AA seq
DB search
MDLSPDFSVSNHQLARSGSHTRSLSVSDLSLASFLPETVNDAIVNGTYDRNLNKETAVNR
NHAGAMGCWDELPRKSYSLPHRYKTHLMGGWRALGRDCSNSPSIPPISPSEFKQQFTLMR
QWFNSFTDEQKNRVLAELLEHIGPSQLHLLSVAIGGRLHHGCPPNCQDPIGWLPPGLALT
IFSYLDPVSLAQASQVCKAWYNLASRDCLWRNLSFHREWQLSLSSHNKQLTRCLHKDGSV
DWKQVFVERYRLHRNWMGAHCHVRTFEGHTEGVSCVQFDDHRIVSGSHDNTIKVWNMRTN
SRWSVQTLVGHSGMVRCLHLAGNRLVSGSADATIKVWDVEETSQWSSINCKVTMIGHSST
VRCLQVDGERVVSGSYDHLVKVWALASGECLRTLTGHQAPVLTVAFDDNKIISGAADKTI
KVWQLDSGLCQKTLVGHEDAVTTLTYDNTTIISGSLDCTIRLWCLSSGQCLGVLDWMSSE
GHTGVIRCLAADSRRIVSASDDKTIKVWDRESRRRLVTLRNHTDGVTCLAFNDHVIVSGS
YDKTVKLWDFSVC
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggacctctcaccagacttcagtgtgagtaatcatcagctggcaagaagtgggagtcat
acccgtagtctgtcggtctcagacttgtcccttgcttcattcctccccgagactgtcaat
gatgctattgttaatggcacctatgacagaaatctcaataaggaaacagctgtcaacaga
aaccatgctggtgcaatgggttgctgggatgaattgcccagaaaatcatatagtcttccg
caccgctacaagacccacctcatgggtgggtggcgtgcactgggaagagattgctcaaat
agtccatccataccacccatctccccctcagaatttaaacaacagttcacgcttatgaga
cagtggttcaacagctttacagatgagcagaagaaccgtgttttagcagaattgctggaa
cacattggtccaagccagctgcatctcctctcggttgccattggaggtcggctgcaccac
ggatgtccgcccaattgtcaagaccctattggttggctcccacctggtcttgctctcact
atattttcctatcttgacccagtttccttggctcaagcatcacaagtgtgcaaagcctgg
tataatttggcctcgcgagactgtttatggcggaatctctcgtttcatcgtgaatggcaa
ctttccctttcttctcacaataagcagttaacacgttgcctacataaggatggttcagta
gactggaaacaggtatttgtagagcgttatcgactccatcgtaattggatgggagcgcac
tgccatgtgcgaacatttgaaggtcacacagagggtgtttcttgtgtgcagtttgatgat
catcgaatagtttctggttctcatgataacaccataaaggtgtggaacatgcggactaat
tcgcgatggtcagtgcagacattagtgggtcactcgggcatggtccgctgtcttcacttg
gccggtaatcgacttgttagtggctcggctgatgctacaataaaggtttgggatgtagaa
gaaaccagtcaatggtcatcaattaactgcaaggtcacaatgattgggcactcttcaact
gtccggtgtcttcaggttgatggggaacgcgtggtaagtggcagctatgaccatttagtc
aaggtgtgggcactggcttcaggcgagtgtctccgaactctcactgggcatcaagctcct
gtgcttactgttgcctttgatgacaataaaatcatatctggtgcagctgataaaaccatt
aaggtttggcagctagattcaggcctgtgccaaaagacactcgtgggccatgaagatgca
gttaccactttaacctatgacaacactaccattatttctgggtcacttgactgcactatc
cgcctatggtgcctctcgtctggccaatgtctgggtgtccttgactggatgtctagtgaa
ggtcatacaggtgtaatacggtgcctagctgccgactcaaggcgaattgtgagtgcttcc
gatgataaaacaattaaggtctgggaccgggaatctcgtcggcggttagtgactctgaga
aaccacactgatggtgtcacgtgcctcgcattcaatgatcacgtgatagtaagcgggtct
tacgataagactgtcaaactttgggatttcagtgtgtgttag
DBGET
integrated database retrieval system
