KEGG   Procambarus clarkii (red swamp crayfish): 123756750
Entry
123756750         CDS       T07930                                 
Symbol
Roc1a
Name
(RefSeq) RING-box protein 1A
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
pcla  Procambarus clarkii (red swamp crayfish)
Pathway
pcla03420  Nucleotide excision repair
pcla04120  Ubiquitin mediated proteolysis
pcla04141  Protein processing in endoplasmic reticulum
pcla04310  Wnt signaling pathway
pcla04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:pcla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123756750 (Roc1a)
   04120 Ubiquitin mediated proteolysis
    123756750 (Roc1a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    123756750 (Roc1a)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    123756750 (Roc1a)
   04350 TGF-beta signaling pathway
    123756750 (Roc1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcla04121]
    123756750 (Roc1a)
   03400 DNA repair and recombination proteins [BR:pcla03400]
    123756750 (Roc1a)
Enzymes [BR:pcla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     123756750 (Roc1a)
Ubiquitin system [BR:pcla04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   123756750 (Roc1a)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     123756750 (Roc1a)
   Cul2 complex
     123756750 (Roc1a)
   Cul3 complex
     123756750 (Roc1a)
   Cul4 complex
     123756750 (Roc1a)
   Cul7 complex
     123756750 (Roc1a)
   Cul8 complex
     123756750 (Roc1a)
   Cul9 complex
     123756750 (Roc1a)
DNA repair and recombination proteins [BR:pcla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      123756750 (Roc1a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      123756750 (Roc1a)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX DUF8003
Other DBs
NCBI-GeneID: 123756750
NCBI-ProteinID: XP_045596002
LinkDB
Position
26:complement(8638322..8647579)
AA seq 114 aa
MSAMEVDPQEEEVEVPSSSTSKQDKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCI
ECQANQASVTSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 345 nt   +upstreamnt  +downstreamnt
atgtcagcgatggaggtcgacccacaggaggaagaagtcgaggtgccctcctctagcacc
tccaaacaagacaagaagaggttcgaggttaagaagtggaatgcagtagcactatgggca
tgggatatcgtcgtcgacaactgtgctatatgtcgtaatcacatcatggatttatgcata
gaatgtcaggccaaccaggcctctgtcacgtcagaagaatgcacggtagcttggggtgtg
tgtaatcatgctttccatttccactgtatatctcgatggttgaagacgcgtcaggtatgc
ccattagacaacagggaatgggagttccagaagtatggtcattag

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