Procambarus clarkii (red swamp crayfish): 123758645
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Entry
123758645 CDS
T07930
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123758645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123758645
Spliceosome [BR:
pcla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123758645
Complex C
U5 SnRNP specific factors
123758645
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Motif
Other DBs
NCBI-GeneID:
123758645
NCBI-ProteinID:
XP_045599126
LinkDB
All DBs
Position
31:complement(15633924..15650645)
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AA seq
975 aa
AA seq
DB search
MDVDLYDEFGNYIGPELDSDEEEDDDDEDDYQDNDQDVNGFDDDDGAGGEEEEVSAQAVV
LHEDKQYYPSAADVYGPEVETIVQEEDAQPLTQPIIQPVKVKKFSHVEKDLPVTCYNLEF
LADLMDNPNLVRNISLVGHLHHGKSTFVDCLIHQTHPEFRSKEDVPVRYTDTLFTEGERG
LSIKATPITLVMQDVRNKSFLMNIFDTPGHVNFSDEVTAAMRLSDGVVVFVDAAEGVMLN
TQRLLKHAVQERLAITVCINKVDRLILELKLPPQDAYYKLRHIVEEVNSLLQQYTDQENP
QTISPLLGNVCFASSQYSLCFTLKSFAKTYAQHFGYELPLEDFSRRLWGDIYFNPRTRKF
TKKPPTSTAQRSFVEFILEPLYKIFAHIVGDVDTHLLTLMEELGIHMSKEEQKMNIRPLL
KLFMSKFIGEFEGFVDMCVQHIPSPKAYGKQKVETTYTGPLDAELAESMMACDPEGPLVV
HTTKQYPNEDATAFHVFGRVLSGTIHANQDVRVLGEKYTLMDEEDSRILTVGRLWVSEGR
YNIEVNAVPAGNWVLIEGIDEPIVKTATITDLPPTSELHIFRPLKFNTQSVIKIAVEPVN
PSELPKMLDGLRKVNKSYPLLSNKVEESGEHIILGTGELYLDCVMHDLRKMYSEIDIKVA
DPVVSFCETVVDTSSLKCFAETPNKRNKITMIAEPLERGLAEDIEGEVVQINWDRRRLGE
FFQTRYDWDVLAARSIWAFGPDHSGPNILVDDTLPSEVDKNLLSSVKDSIVQGFQWGTRE
GPLCEEPIRNCKFKILDAVIAEEPLHHGGGQVIPTARRVAYSAFLMATPRLMEPYYFVEI
QAPADCVSSVYTVLTKRRGHVTQDAPVAGSPLYTIKAFIPAIDSFGFETDLRMHTQGQAF
CLSVFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDDP
MLLELARQDVTLNYA
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgatctttacgatgagtttggtaactacattgggcccgagctcgactctgac
gaggaggaagatgacgacgacgaggacgactaccaagacaacgaccaggatgtgaatggt
tttgatgacgacgatggggccgggggagaggaagaggaagtctcggctcaggctgtggtg
cttcacgaagacaagcagtattaccccagtgctgccgacgtctatggcccagaagttgag
accattgtacaggaagaggatgctcaacctttgacccagcctatcattcagccagtaaag
gtgaagaagttcagccatgttgagaaagacttaccagtcacctgctacaatctggagttt
ctggctgatctgatggacaacccaaacttggttcgaaatatctctcttgtgggtcatctt
catcatggcaaaagcacctttgtggactgccttatacaccaaacacacccagaattcagg
agcaaggaggatgttcctgtccgatacacggacacactgtttactgagggtgaacgaggg
cttagcatcaaggctactcccattactctagtgatgcaggatgttcgcaacaagagcttt
ctcatgaacatctttgacaccccaggacatgtaaacttctctgatgaggtgacagccgct
atgagattgagtgatggtgtggtggtttttgtagatgctgcggagggtgtgatgctcaac
acacaacgactcctgaaacatgcagtacaagaacgattggctatcactgtgtgcatcaac
aaggtggaccgtctcatactggaactaaagctgcctcctcaagatgcttattataaacta
agacacatagtggaagaggttaactctcttctccaacagtacacagaccaggagaatcca
caaaccatctcccctttgttaggcaatgtttgctttgccagttctcagtattctctctgt
tttactctaaaatcctttgctaagacatacgcccaacattttggatacgaacttccatta
gaagatttttcaaggaggttgtggggcgatatatacttcaaccctcgaactaggaaattt
acgaagaagcctcccacatcaacagctcaaaggagctttgttgaattcatccttgaacca
ctttataaaatttttgcacacattgttggtgatgtagatactcatctgttaacgttaatg
gaggagttaggcatccacatgagcaaagaagaacagaagatgaacatcaggccattgctg
aaactattcatgtctaaattcattggagagtttgaaggatttgttgacatgtgtgttcag
cacattccatcccccaaggcatatgggaagcagaaggtggagactacttacacgggtcca
ctggatgcagaactggcagaaagcatgatggcctgcgaccccgagggcccgctcgttgtt
cacaccaccaagcagtaccccaatgaggatgcaactgcttttcatgtatttggacgcgtt
ctctcgggaaccattcatgccaaccaagatgtccgtgtgttgggtgaaaaatacacactc
atggatgaggaagattcccgtatactgactgttggaaggttgtgggtgtctgaaggcagg
tacaatatagaggtgaatgctgtacctgctggtaactgggtcttgatagagggaattgat
gagcctattgttaagactgctaccatcacagatctccccccgactagcgagctacacatt
ttccgaccgcttaaatttaacactcagtcggtcataaaaattgcagtcgagccagtgaat
ccatcagagttgccaaagatgttagatggccttcgtaaagtgaacaaatcctacccactt
ctaagtaataaagtagaagaatctggagagcatattattcttggaacgggagaattgtac
ctggattgtgttatgcatgatttgaggaaaatgtactctgagattgacattaaagttgct
gatcctgtggtcagcttttgtgaaactgtggtcgacacatcctcgctaaaatgctttgca
gaaactccaaacaagagaaataagatcactatgattgctgaaccattagaaagaggttta
gctgaagatattgaaggagaagtagtgcaaataaactgggacagaagacgactaggtgaa
tttttccagactcgttacgattgggatgtattggctgctcggtctatttgggcatttggg
cccgatcacagtggtccaaatatcttagtagatgacactttgccctcggaagttgacaaa
aatctgttgtcgtctgtaaaggattctattgtgcaaggttttcagtgggggacaagagaa
ggtcctctctgtgaagagcctattcgaaattgcaagttcaagattcttgatgcagtcatc
gccgaggagcctttgcaccacggaggtggtcaagttattcccacagccaggagagttgca
tactctgccttcttgatggcaacaccacgactcatggaaccatactactttgtggaaatc
caggcaccagcagattgtgtgtcatcggtatatacagtgttaaccaaacgacgtggccat
gtaacccaggatgctcctgtagctggttctccgctctatactatcaaagcttttataccg
gcaattgattcgtttggatttgagacagatctgcgtatgcatacgcagggacaggccttc
tgtctgagtgtatttcatcattggcagattgtgccgggcgatcctctagataagagcatt
gtgattcgacccttagagccccagcctgccacgcatttggcccgtgagtttatgatcaag
acccgacgaagaaaaggtctttcggaggatgtgtctattaacaagttcttcgacgatcct
atgttgttggaacttgccagacaagacgtgacactcaactatgcttaa
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