Paraprevotella clara: PC1C4_17250
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Entry
PC1C4_17250 CDS
T08732
Name
(GenBank) MexH family multidrug efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pclr
Paraprevotella clara
Pathway
pclr01501
beta-Lactam resistance
pclr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pclr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PC1C4_17250
01503 Cationic antimicrobial peptide (CAMP) resistance
PC1C4_17250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pclr03036
]
PC1C4_17250
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pclr02000
]
PC1C4_17250
01504 Antimicrobial resistance genes [BR:
pclr01504
]
PC1C4_17250
Chromosome and associated proteins [BR:
pclr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PC1C4_17250
Transporters [BR:
pclr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PC1C4_17250
Antimicrobial resistance genes [BR:
pclr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PC1C4_17250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND_2
YknX_C
RND-MFP_C
BSH_CzcB
CzcB_C
HH_MFP_RND
Beta-barrel_RND
BSH_CusB
HH_EMRA
HH_CyaD
Biotin_lipoyl
HH_AAEA_pHBA
BSH_YhbJ
HH_YBHG
BSH_LcnD
BSH_YknX
HH_AprE
Motif
Other DBs
NCBI-ProteinID:
BDI75003
LinkDB
All DBs
Position
complement(2401123..2402205)
Genome browser
AA seq
360 aa
AA seq
DB search
MNKKVKWGLIAFIACGLVVWGVYSQLPKLNSELAQADKVESGDKAKKNILNVNALKVRTG
VLTDEFTVSGNLLPDEEVDLSFETSGQVVEIGFKEGSHVTKGQLLAKVNDRQLQAELKRL
QAQLKLANDRVYRQRTLLQHDAVSQEAYEQVRTELETLKAEIDIVKAQIELTELRAPFDG
VIGLRQISVGAYASPTTIVSKLTRIIPLKVEFSVPERYVNEVNPGTALTFTIDGSLQNFP
AKVYAKESAIDENTHTLKVRALYENPNGRLTPGRYASINLKKQEIQDAIAIPAEAIVPEM
GKDKVFLYKSGKAQPVEVTVGLRTEERVQVLKGLQVGDTLITSGTLQLRTDLPVVLDRVD
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaagtgaaatgggggctcattgcctttatcgcatgtggtttagtggtatgg
ggagtttattcccaattacccaaattaaattccgaattggctcaagccgacaaagtagaa
agcggagataaagcaaaaaagaatattttgaatgtgaacgcactaaaagtccgtacaggt
gtcctcacagacgaattcacagtaagcggcaatctattaccagacgaagaagtagacctt
tccttcgagacatccggacaagtcgtagagattgggttcaaagaaggaagccacgtcacc
aaaggccaactacttgccaaggtaaacgacaggcaattacaggccgaattgaaacgcttg
caagcccaactcaaactggccaatgacagggtgtaccgtcaacgcaccctattgcagcac
gatgcggtaagccaggaggcatacgaacaagtacgtacggaactcgaaaccttaaaagca
gaaatcgacatcgtaaaagcccaaatagagttaacggaattacgggcgcctttcgacgga
gtgatcggcttgcgccaaatcagcgtaggagcatacgcatctcctaccaccatcgtgagc
aaactcacccgtatcatccctctgaaagtggagttttccgtcccggaacgttatgtgaat
gaagtcaatccgggtacggctctgacattcaccatagacggttctttacaaaacttcccg
gcaaaagtatatgccaaagagtctgccattgacgaaaacacgcacacgctgaaagtccgt
gccttatatgagaatcccaacggacgccttacgccgggacgttatgccagcatcaatctc
aagaagcaggaaatccaagatgccattgctatcccggccgaagccatcgtaccggaaatg
ggtaaagataaagtattcttatataaatccggcaaagcccaaccggttgaagtgaccgta
ggtctgcgcacagaagaacgcgtgcaagtattaaaaggattgcaggtgggagacacgcta
atcacatccggaacgttgcagttgcgcaccgacttacccgttgtactcgaccgcgtagat
taa
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