Pedobacter cryoconitis: AY601_1454
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Entry
AY601_1454 CDS
T04341
Name
(GenBank) hypothetical protein
KO
K20483
class I lanthipeptide synthase [EC:
3.13.2.4
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm02020
Two-component system
pcm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AY601_1454
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AY601_1454
Enzymes [BR:
pcm01000
]
3. Hydrolases
3.13 Acting on carbon-sulfur bonds
3.13.2 Thioether and trialkylsulfonium hydrolases
3.13.2.4 lanthipeptide synthase
AY601_1454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lant_dehydr_N
Lant_dehydr_C
PqqD
Motif
Other DBs
NCBI-ProteinID:
AMP98371
UniProt:
A0A127VB24
LinkDB
All DBs
Position
complement(1680093..1683146)
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AA seq
1017 aa
AA seq
DB search
MPKYNFYNKLVLRTSLLPYTDIQAALLNSSYLENNIFLEALFISAPELFELYLADPENEQ
IKLTISKYFLRASFRTTPFGLYAGMNVIDWSAGEKKTIGLHGFKRVTKLDISCLDAICRS
IMGNEMMKSVVKLYPNSSIYKVNNSYRYIEPHSLSQFQLSSFDYSSISKTILNFCRDGKT
FPQIVDYLTASYPGEENAIKDFLQEMISAGILVYALIPQLIGTDPLEQIIVALEQTGTLH
HSEEINSYVNDLKAITGLLSEIDIQRVQNRSNYLKLKQHIESVFGIKVPLHKLVNVSMFP
AYTGGLDKSFQHPLIEGLEVLKILNHRPNKNPMLQEFIAKFADRYETQQKPLLEILDQEN
GIGYSDISISGEIMNGLMKSIKPLAKDKTEQAWDAMSSYLLNKVIESQRNREEEIRLEKS
ELLKLVNVEGDGFIQENLFVLFRVADERIFLESAGLHGAINTITRFATIDDNIKEVAMAF
SPPFDEQDQPIYAEISHYPDPIMGNVLIRPRLTRYQISIVYNSAIPAEDQIPVNDLLISL
RGEVLVLHSKRLKREIIPILSSAHNFHHSRNLPVYKFLCDLQLQQDKNSLLFQWPAALKG
LVFFPRVVCRSSVLSLASWNFKDQDLALFIQDIKEFQHTPFMKKWGVPRKFIVSDGDNEL
FADLNEESSRKVILQLLSKKSAVLIKELFLPVRDTVVSGENGNTNQFTAFLKGKGNSIYT
GEKTIANIPKVREFYPLSEWIYFKIYCGGTISDEILVGTIDKLTNRLLKDKLIDKWFFIR
YTDPGYHIRVRLAVKNKNDIPRITAQLNRCLEILISRKKAWKIQFDTYKPEIERYHTYGM
DISETAFFLSSRYTLKLLAYLNRSIGSEQQVLFLSMVSVDHILSAFNFETKEKLRLVGQF
KKSMESGYKIDTDFWKKIDVQFKANKSGIAELMVLQPANGSEINKLLSNWKVELAELYKT
AKATGPDLESYIFSLAHMQVNRLFKEHQKINELITYQLLSKYYSLVLYSKNQAVISP
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaatataatttttataacaagctggtactgcgtacttctcttttaccttatact
gatatccaggcagctttattgaacagtagttatcttgaaaataatattttcctggaagcg
ctttttataagtgcaccggagctatttgagttgtacctggcagacccagagaatgagcaa
ataaagctgaccatttcaaaatattttctccgtgcttctttcagaactactccctttggt
ttatatgcagggatgaacgtgattgactggtctgccggagaaaaaaagaccatcggatta
catgggtttaaacgggtgacaaaacttgatatttcttgcctggatgctatctgcagaagt
ataatggggaatgagatgatgaaaagtgtagtgaaactttatcccaattcttcgatatat
aaagtcaataattcttatcgttatattgaacctcatagcttatctcagttccagttgagt
tcttttgactattcttcaattagtaagacgatactaaacttttgcagagacggaaagaca
tttccgcaaatagtggattatttaacagcatcttaccccggtgaggaaaatgcaataaag
gactttttgcaggaaatgatatccgctggaatattagtatatgcactcattcctcagctc
ataggtactgacccgctggagcaaatcattgttgctcttgagcagacgggaactttacac
catagtgaggaaatcaatagctatgtcaatgacctcaaagctattacaggtctgcttagt
gaaattgatatacaaagagtacagaaccgttcaaactatctgaaactaaaacaacatata
gagagtgtattcgggattaaggtccctctccataaactcgttaatgtttctatgtttcct
gcatataccggaggacttgataaaagttttcagcatcccctgatagaaggtctggaagtt
ttgaagattttaaatcacaggccaaataaaaatcccatgcttcaggagtttattgcaaaa
tttgctgatcgttatgaaacacagcagaaaccattgctcgaaattctggaccaggaaaat
ggaattggatactcggatatttccatttcaggagaaattatgaatgggctgatgaagagc
attaaaccattagctaaggataaaacagagcaggcctgggatgcaatgagtagttacctg
ttaaacaaggttatagaaagtcaacgcaatcgggaagaagaaatcaggctggaaaaatct
gagctgttgaagctggtcaatgtagagggtgatggatttatccaggagaatctatttgta
ttattccgtgtagctgatgaacgtatatttctggaaagtgctggtttacatggagcaatc
aatacgattacaaggtttgctacaatagacgataatattaaagaggtggccatggcgttt
tcaccaccgtttgatgaacaggatcaacccatatacgcagaaatcagccattatccagac
ccgataatgggtaatgttctaatcagaccccggttaacaagatatcagatttcaattgtt
tacaactcggctattccggcagaagaccagattccggtaaatgatttgttaatatctctg
aggggagaggtactggttctgcattcaaagcggttgaaacgggagattattcccattctt
tcaagtgcacataattttcatcatagcagaaaccttcctgtttataagtttttatgtgat
cttcagttgcagcaggataaaaattcgcttttgtttcagtggcctgcagccttaaaggga
cttgtcttttttccaagggttgtctgcagatccagcgttttaagcctcgcaagctggaat
ttcaaagaccaggaccttgctttgttcattcaggatattaaagaattccaacataccccg
ttcatgaaaaaatggggtgtacctcgaaagtttatagtgtcagatggagataatgaactt
tttgcagaccttaatgaagagtcaagcagaaaagttatacttcagttgttatccaaaaag
agtgctgtactaattaaggaactttttcttcctgtgcgggatactgttgtttctggtgag
aatggaaatacgaatcaatttacggcctttttgaaaggcaaaggtaactcaatatatacc
ggagaaaaaactattgccaatatcccgaaagtcagggaattttatcctttaagtgaatgg
atctattttaaaatctattgtggcggaactatttctgatgaaatcctggtagggaccata
gacaagctaaccaatagattattaaaagataaactgatagataagtggttttttatccgt
tatactgatccagggtaccatataagagtcaggttagctgtaaagaacaaaaatgatata
cccaggataacagcgcagctcaacaggtgtctggaaatactcattagcaggaagaaagca
tggaaaatacagtttgacacttacaaaccggagattgagcgttatcatacttatggaatg
gatatatcagagactgcattttttctcagcagccggtatacgctaaaactgttagcttat
ttgaatagatcgattggcagtgagcaacaggtactatttttatctatggtgtcagtagat
cacatcctgtcggctttcaattttgagactaaagaaaaacttcggttagtgggccagttt
aaaaaatccatggaaagcggatataagatagatacagatttttggaaaaaaatagatgtc
caatttaaagcaaataaatcggggattgcagaactgatggttttgcaaccagccaatgga
tccgaaataaataagttgttgtcgaattggaaggttgaattagcggaattgtataaaacg
gcgaaagcaacgggacctgatttggaatcatatattttcagccttgcccatatgcaggtg
aacaggctgtttaaagagcaccagaagataaatgaattgatcacttatcaattattgtct
aaatattacagcctggttctttattcaaaaaatcaggctgtaatatctccttaa
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