Pedobacter cryoconitis: AY601_1528
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Entry
AY601_1528 CDS
T04341
Name
(GenBank) Putative RND efflux membrane fusion protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm01501
beta-Lactam resistance
pcm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AY601_1528
01503 Cationic antimicrobial peptide (CAMP) resistance
AY601_1528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcm03036
]
AY601_1528
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcm02000
]
AY601_1528
01504 Antimicrobial resistance genes [BR:
pcm01504
]
AY601_1528
Chromosome and associated proteins [BR:
pcm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
AY601_1528
Transporters [BR:
pcm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AY601_1528
Antimicrobial resistance genes [BR:
pcm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AY601_1528
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
Beta-barrel_RND
BSH_CusB
Biotin_lipoyl
BSH_YknX
HH_EMRA
BSH_CzcB
HH_YBHG
Beta-barrel_RND_2
HH_AprE
HH_CzcB
TP096X_C
Motif
Other DBs
NCBI-ProteinID:
AMP98444
UniProt:
A0A127VAW4
LinkDB
All DBs
Position
complement(1763571..1764734)
Genome browser
AA seq
387 aa
AA seq
DB search
MKTSIQIGLLFLTGLTLASCGNDKNKAAQAAAAAGQVKEYKVLKLEPRSATLNTDYPASI
QGQQNIEIRPRVDGYIDKIFVDEGAVVKIGQPLFKISAPQYEQEVRTANASIANAMAQLN
AAKLAINKVKPLVEKDIVSKYELESAQYTYESAQAAVATAKASLVNAKTNLGFTTVTSPV
NGVVGSIPFRLGSLVSSTTADPLTTVSSIGNVYAYFALNEKLLLDFTKDGSGSFAQKLAK
LPKVSLLLSDGSPYTEEGRIETVNGLINTATGSANIRARFPNPKGIIRSGSSATVRIPNA
VKDAILVPQSATFELQDKRFVVVVGQDGKTKNVAVTVMENTAGNFFVVESGLKAGDQIVL
EGVATLKDGTQIKANAENPETVYADLK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatcaatacagattgggctcctgttccttacaggattaaccctagcctcatgt
ggcaacgataaaaacaaggccgcacaggccgcagccgcagctgggcaggttaaggaatac
aaagtcctgaaactggaacccagatctgccacattaaatacagattatcctgcaagtata
caaggacagcagaatatcgaaatcaggccaagagtggacggatatatcgacaaaatattt
gtagatgaaggtgctgttgtaaagattggtcagccattattcaaaatcagcgcaccacaa
tacgagcaggaagtaagaacagctaatgccagtatcgcaaatgcaatggcacaactgaat
gctgcaaagttggcaatcaataaagtaaagccgctggtagaaaaagatattgtaagtaaa
tatgagctggaatcagcacaatatacttatgaatctgcgcaggcagcagtagcgactgcg
aaagctagtttagtcaacgctaaaacgaatttaggcttcactacagtaaccagtcctgtc
aatggggtagtcggttctattccatttcgtctgggaagtctggtaagcagcaccactgct
gatcctttaactacagtgtcgagtataggaaacgtatacgcttattttgcgctgaatgaa
aagttattgttagactttactaaagatggtagtggttctttcgcacaaaaactagccaaa
ctacctaaagtttctttattactttctgacggatcaccttatacagaagaaggacgcata
gaaacagtcaacggattaatcaatacagctacaggttcagcaaatatcagagcgcgtttt
ccaaatcccaaaggtattatccgtagcggaagcagtgcaacagtaagaattcccaatgct
gtgaaagatgcaattctggttcctcaaagcgcaactttcgagttacaggataaacgcttt
gtagttgtagtaggacaagatggcaagaccaaaaatgttgcagtaacagtgatggaaaat
acagcaggtaatttcttcgtggtcgaaagcggcttaaaagcaggagatcaaattgtatta
gaaggagtagcaaccctaaaagacggcacgcagatcaaagcgaatgctgaaaacccggaa
actgtctacgcagacttaaaataa
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