Pedobacter cryoconitis: AY601_1848
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Entry
AY601_1848 CDS
T04341
Name
(GenBank) Multidrug transporter AcrB
KO
K18138
multidrug efflux pump
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm01501
beta-Lactam resistance
pcm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AY601_1848
01503 Cationic antimicrobial peptide (CAMP) resistance
AY601_1848
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcm02000
]
AY601_1848
01504 Antimicrobial resistance genes [BR:
pcm01504
]
AY601_1848
Transporters [BR:
pcm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AY601_1848
Antimicrobial resistance genes [BR:
pcm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AY601_1848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
ZapD
Patched
Rpp20
Motif
Other DBs
NCBI-ProteinID:
AMP98757
UniProt:
A0A127VBZ9
LinkDB
All DBs
Position
complement(2127685..2130831)
Genome browser
AA seq
1048 aa
AA seq
DB search
MVETFIRRPVLSLVISLSLILLGVLAFFSLPITQFPDIVPPSVVVTASYNGANAEVCAKA
VATPLEKAINGVPGMTYMNSVSSNNGVTLIQVFFNVGTDPDQAAVNVQNRVTTVLDELPE
EVIKAGVTTEKEVNSMLLYLNVTSNDKDMSEEFIYNFADINVLQELKRIDGVGFVDIMGA
RDYSMRVWLKPDRMLSHNISADEVISTMRKQNIEAAPGVAGENSGKGTEVKQYVLKYTGK
FNSKEDYENLVLKAEKNGALVRLKDIADIEFGTVSYDMVSKTDGKPSASIMIKQRPGSNA
SEVIDNIKEKMAELKGTSFPPGMEYNFAYDVSRFLDASIHEVLRTLVEAFILVFIVVYIF
LQDFRSTLIPALAVPVALISTLAFLQILGFSINILTLFALVLAIGIVVDNAIVVVEAVHV
KMSEEHLPPMEATIAAMKEIGGAIIAITMVMSAVFIPVAFLSGPVGVFYRQFSLTLAIAI
VISGINALTLTPALCAIMLKHQEGNTAGKGLMGRFFKLFNKGYDQTEKKFSHLIGYIIGR
KPITICLFLFFCIATWTGSQILPSGFIPTEDQGMIYVNVTTPPGSTVERTEKVLDQIQQS
TRSLKMVENVSTLAGYSLMSDITGASYGMGMINLAPWDKRKETVTEVISALKEKTRGISD
ASIEFFAPPTVPGFGNASGFELRLLDKNKSEDLNKTAQVTNEFLKALRSHPSISGAFTSF
DPNFPQYMIHIDQDMAAQKGVSIDNAMSTLQTLVGSYYATNFIRFGQMYKVMLQAYPEYR
SKPNDLLRLHVKNDRGEMIPYSTFVKLERVFGPEQINRYNMYTSAMINGDASADFSSSDA
IAAVEATAKEKLPRGFSIEWSGMTREQILSGNQAIYIFIICLIFVYLLLAAQYESFLLPL
PVLLSLPAGIAGAFFTLKLAGLENNIYAQVSLVMLIGLLGKNAILIIEFAELKRREGATV
AEAAKAGAVSRLRPILMTSFAFIAGLIPLCIATGAGAVGNRSIGTAAVGGMLIGTLFGVI
IIPGLYAIFASIGKKKPKLVIENNKENA
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaacatttattagaaggccagtattgtcactggttatctctctctccttaatt
ctgctgggtgtgctcgcatttttttcgctgcccattacgcaattccccgatattgttccg
ccatccgtagtcgttacagcaagttacaatggagcaaacgcagaagtatgtgccaaagcc
gtcgctactccgcttgaaaaagccatcaatggtgttcctggaatgacttacatgaactct
gtaagcagcaacaatggcgtaacattaatacaagttttctttaatgttggaacagatccc
gaccaggctgcagtaaacgtgcagaacagggtgactacggtattggatgaactaccagaa
gaagttatcaaagcgggtgtaactacagaaaaggaagtaaacagtatgttgctttatctg
aatgtgaccagtaatgataaagatatgagcgaggaattcatttacaatttcgcagatatc
aatgttcttcaagaactaaaacgcatagatggggttggttttgtagatattatgggtgcc
agagattattctatgagggtatggctgaagccagacaggatgttatctcataatatatct
gcagatgaagtcatcagcaccatgcgtaaacagaatattgaagcggcacccggtgttgcc
ggtgaaaattctggaaaaggaactgaagtaaaacaatacgttttaaaatatacaggaaaa
tttaacagcaaggaagactatgaaaaccttgttttaaaagctgaaaaaaatggtgcttta
gttaggttaaaagatatagcggatatcgaattcgggaccgtaagttatgatatggtctcc
aaaacagatggcaagccttctgcctcgattatgattaaacaaaggcctggctcaaatgcc
agtgaggttattgacaatatcaaggagaaaatggccgaattaaaaggtaccagttttcca
ccaggaatggaatataattttgcttacgatgtttcccgttttttggatgccagtattcat
gaagtactccgcacacttgtggaggcctttatcctggtatttatcgtggtatatatcttt
ttacaagatttcagaagtaccctgattcctgcattagcagtaccagtggcgctcattagt
actttggcctttttacaaatattgggtttctccatcaatatacttacgctgtttgcgctt
gttctggcaatcggtattgtggtggataatgcgattgttgtggtagaggctgtgcatgtg
aaaatgagcgaagagcacctgccgccaatggaggcaactattgctgcaatgaaagaaatt
ggtggtgctatcatagctattaccatggtgatgtctgctgtatttattccggtagccttc
ctgtcaggacctgtgggtgttttttaccggcagttttcacttacactagctattgccatt
gtcatttctggaattaatgcattaacgttaacaccagctttatgtgcaattatgctcaaa
caccaggaaggaaacactgctggtaagggcctgatgggcagattcttcaaactgtttaac
aaaggatatgatcaaacagaaaagaagtttagtcaccttataggctatatcattggacgt
aaacctattactatttgtctgttccttttcttttgtatcgctacctggacaggaagtcaa
atactgccgtctggatttattccgacagaagatcagggaatgatctatgtaaatgtaacc
actccaccaggatcaaccgtagaaagaacagaaaaagtactggatcagatacaacaaagc
acgcgcagccttaaaatggtagaaaatgtaagtacacttgcggggtacagtctgatgagt
gatataacaggagcatcatacggtatgggtatgattaatctggccccatgggataaacga
aaagaaacagtaacggaagtaatctcagcattaaaagaaaaaaccaggggaatcagtgat
gcctcgattgaattttttgccccgccaactgtacctggttttggaaatgccagtggattt
gaactgagactcctggataagaacaagagtgaagacttgaataaaactgcccaggttacc
aatgaattcttaaaagcgctgcgaagtcatccgtcaatttcaggagcctttacgagtttt
gatccaaattttccgcagtatatgatacatattgaccaggatatggctgcacagaaaggt
gtttctatagacaacgcaatgagcacactgcaaactttagtaggtagttattatgccact
aactttatccgtttcggtcaaatgtataaggtaatgcttcaggcttatccggaataccgt
agcaaacctaatgatcttttacggttgcacgttaaaaatgataggggtgaaatgattcct
tattctacatttgtaaagctggaaagagtttttggaccagagcagatcaatcgttacaat
atgtatacttcggcgatgatcaatggagatgcttcggccgattttagcagtagtgacgcc
attgctgcagttgaggctaccgccaaagaaaaacttccccgtggcttcagcatcgaatgg
tctggaatgacccgggaacagatcctttcggggaaccaggcaatttacatttttatcatc
tgtcttatatttgtttatcttttgctcgctgcacaatacgaaagttttctactcccctta
ccggtgctgctctcacttcctgcaggtatagccggtgcctttttcaccttaaagctcgca
gggcttgaaaacaatatttatgcacaagtatcactggtcatgctcattgggctattggga
aaaaatgcaatcctgattatcgagtttgccgagctcaagcgcagagaaggcgcaacagta
gcagaggccgcaaaagccggagctgtatccagactaaggccaattttaatgacctcattt
gcatttattgccgggttgataccgctttgtattgctactggtgcaggtgctgtaggtaac
cgttccataggaactgctgcggtaggcggtatgctgatcggaacacttttcggagtcatc
attataccaggactatatgcaatttttgcgtcaataggtaaaaagaaaccaaaattagtt
attgaaaataataaggaaaacgcgtaa
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