Pedobacter cryoconitis: AY601_2739
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Entry
AY601_2739 CDS
T04341
Name
(GenBank) hypothetical protein
KO
K20483
class I lanthipeptide synthase [EC:
3.13.2.4
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm02020
Two-component system
pcm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AY601_2739
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AY601_2739
Enzymes [BR:
pcm01000
]
3. Hydrolases
3.13 Acting on carbon-sulfur bonds
3.13.2 Thioether and trialkylsulfonium hydrolases
3.13.2.4 lanthipeptide synthase
AY601_2739
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lant_dehydr_N
Lant_dehydr_C
CA109-like
Motif
Other DBs
NCBI-ProteinID:
AMP99622
UniProt:
A0A127VE33
LinkDB
All DBs
Position
complement(3235965..3239093)
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AA seq
1042 aa
AA seq
DB search
MIKSYSFVLLRAPLQSLNLANDFSANRQTLLQEGIYLSSPEFWKELLKENELNAKEKEKL
ELSFAKYWLRSCSRCTPYGTLAGVKLVGIKPEETNLQLDHADQHLRSVRLDMNYLNEIIT
YLNTVPEIVRQLKFFTNNSLYELPDSYRYATYSLIDTQRVYELTSIEKTNYITDILFAAQ
KGVTLESLAQILKTHENISLEEAAEFIADMVDSQLILSDLEPCVTGKDPLDVLIEQLQTL
QHVDDLLLKLKEVQQLIKNPKEGVGYYTKIEDSLKALDFPIQIPANLLQTDLFFAAKAQT
IDQSIIDRILKQTEDLYVLSISGEGRDLNTFKSKFSARYEFEEVPLSLALDAELGIGYAG
SDQSSAGENSLVENLILKGPVAGKTINFDYIQEFVLNKHNDYLQHQKTVIEITEEELKAF
KPRIAAYKFSNSLHLMGSLLKSDGKLDIENFIFELSSFGGTSSGNLLSRFAHGDQELCDF
TKEILQEEEQEFPDHIYADIVHLPQARVGNVLLRPLLRNYEIPYIGKSGLTAENQIPVED
IMVCVKNNKVLLRSKKHNKYIIPKLTSAHNFSTRSLPVYKFLCDLQTQGQAQPDAWNWGV
LSSLTYLPRVVYKNLIVRKARWALKKEELPAIPKERNGYLNYCQALRTQYHIPQKVAYVE
HDNKLLIDLEQQTGADLFIHYLKKYENVQLEEFLFTSENCIVYDANGNPHTNELIIPLKR
EPEGSENSLVKRAVKSNFLTPKDEIQVKRKFSPFSEWLFFKIYCGPTVGERILKKELLDF
VEHGIGQNLFEKFHFIRYIDESFHIRVRFYNSDLTKQWKVQQQFMEVLEPLLANNLISKI
VLDTYSRELERYGASIIEEVESLFFNDSLAVLKFARLLDSPELEEYRFLFALRGADMLLT
DFGYTTLAKKELLKRLQAGFFREFGSDPGLQKQLNEKYRQKQKSIFLHMNADLDELNEIE
EAVAVYQNRSAMNSLIYQNIQVKSGNQTLPHDLMESLLHMYLNRLLVNNPRKHELVIYHF
LEKYYSSQLAISTHMPKLAITQ
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaagttattcctttgttttactgcgtgccccattgcagagcctgaacttagcc
aatgacttttcggcaaacagacaaaccttacttcaggaaggaatttatttatcctctccc
gaattctggaaagaactgttaaaagagaatgaacttaatgcgaaagaaaaggaaaaactg
gagctgtcctttgctaaatactggctgcgcagctgtagcagatgtacaccatacgggaca
ttggcaggtgttaaattggtaggtatcaaaccagaagaaactaatcttcaactggatcat
gccgatcagcatcttcgtagtgtccgtttagatatgaactatcttaatgaaattatcact
tacctgaacaccgttcctgaaattgtcagacaactaaagttctttactaacaatagttta
tatgaactccctgacagttatcgctatgcaacttattctttgatagatacacagcgcgtt
tacgaactgacctctatagaaaagacaaattatattacggatattctttttgcagcccaa
aaaggcgttacactggaaagtctggcacaaatacttaaaacccatgaaaatataagtctg
gaagaggccgctgaatttattgcggacatggttgattctcaacttatcttatcagattta
gaaccctgtgtgaccggtaaagatcccctggatgtgttaattgagcaattacaaacgctt
cagcatgtcgatgatttactcctgaaattgaaggaagttcaacagctgattaaaaatcca
aaggaaggagtgggctactatacaaaaatagaagatagcttaaaagcacttgattttcca
atacaaattccagctaatttattgcaaactgaccttttctttgcagcaaaagcgcaaaca
attgatcaaagtattattgaccgtattcttaaacaaaccgaagacttatatgtcctgagc
atttcgggcgagggcagggatctgaatacatttaaaagtaagttttccgcgcgttatgaa
tttgaagaagtcccactatcattagcattagatgcagaactgggaattggttatgctgga
agtgatcaatcatcagcaggcgaaaacagcctggttgagaacctcattttgaaagggcca
gttgccggaaaaactataaattttgattacatacaagaatttgtcctgaataaacacaac
gactatcttcaacatcaaaaaactgttattgaaataacggaagaagaattaaaggcattt
aagcccagaattgcagcttataaattttccaatagcctacacctgatgggaagtttgctg
aaatcggatggtaagctggatatagaaaactttatttttgagctttccagttttggaggc
acttcctctggcaatctcctgtccagatttgctcatggggaccaggagctatgcgatttt
acaaaggaaattcttcaagaggaagagcaggaatttccggatcatatttatgcagatatt
gtgcatctcccgcaagccagggttggcaatgtgctgctcagacctttattgcgcaattat
gaaataccttatatcggtaaatctggtttaacagcagaaaaccagatacctgtagaagat
attatggtttgcgttaaaaacaacaaagtccttttgagaagtaaaaagcataataaatat
attattcccaaacttacttctgctcacaatttctcgacgcggagtttgccagtttataag
ttcctatgcgacttgcaaacacaagggcaagcacagcccgatgcctggaattggggtgta
ttgtcttcgctgacttatctgccaagagttgtttacaaaaacctgatcgtcagaaaagcg
cggtgggcgcttaaaaaagaagaactgccagctatcccgaaagaaagaaacggatattta
aactattgccaggcactgaggacccaataccatatcccacagaaagttgcgtatgtagaa
catgacaataagcttttaattgatttggaacagcagacaggagccgacttattcattcat
tatctgaaaaaatatgaaaatgtacaactcgaggaattcctctttaccagcgaaaactgt
atcgtatacgatgcaaatggaaatccgcataccaatgaattgatcatccctttaaaaaga
gaaccagaaggttcagaaaatagcttggtaaagcgtgctgtgaaaagcaattttctgact
ccgaaggatgaaatccaggttaaaagaaagttttcaccctttagcgagtggttattcttc
aaaatttattgcgggccaacggttggggaaagaatactaaaaaaggaactgcttgatttt
gtggagcatggcatcggacaaaatttatttgagaaatttcatttcatcaggtatattgat
gaatccttccatatccgggtcagattttacaactcagacttaacaaagcaatggaaagtt
caacagcaattcatggaagtactggaaccgctgctggccaataacctgatcagtaaaatt
gtattagatacttattcaagagaactcgaacgttatggcgcttccatcatagaagaagta
gaatctctgttttttaatgatagcctggcggtactcaaatttgccagattgctggatagc
cctgaattagaagaataccggtttttatttgcactgagaggagcagatatgcttttaacc
gattttggttatacaacccttgcaaaaaaagagctgttaaaaagacttcaagcgggtttt
tttagagaatttggcagtgatcctggcttacaaaagcaattgaatgagaaatatcgccag
aagcagaaaagtatctttttgcatatgaatgctgatttagacgaattaaatgagattgaa
gaagcggtagctgtttatcaaaacaggtcggcgatgaacagtttgatttatcaaaatatt
caagttaaatcaggcaatcaaacactgccccatgacctgatggaaagcctgttgcatatg
tatctgaatcgtttgctggttaacaatccgcgtaaacatgaattggttatttatcatttt
ctggaaaaatattacagctcacaactggctatctctacccatatgcccaaattagctatt
actcaataa
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