Pedobacter cryoconitis: AY601_3762
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Entry
AY601_3762 CDS
T04341
Name
(GenBank) Isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AY601_3762
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcm01007
]
AY601_3762
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcm03016
]
AY601_3762
Enzymes [BR:
pcm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
AY601_3762
Amino acid related enzymes [BR:
pcm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
AY601_3762
Transfer RNA biogenesis [BR:
pcm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AY601_3762
Prokaryotic type
Other AARSs
AY601_3762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
AMQ00622
UniProt:
A0A127VHB7
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All DBs
Position
4459625..4463017
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AA seq
1130 aa
AA seq
DB search
MYREFKQLELPKIGEEILQFWKEENIFEKSISTRSKANPFTFYEGPPSANGMPGIHHVMA
RAIKDIFCRYKTLKGFQVKRKGGWDTHGLPIELAVEKKLGITKVDIGVKITVEEYNAACR
EEVMRYTDIWNDLTEKMGYWVDLEKPYITYENEYIESLWWILKTFYDKGLLYKGYTVQPY
SPAAGTGLSSHELNQPGTYKMLKDTSITAQFAIKREQQHPALSSIFENDTEDTSFIAWTT
TPWTLPSNGALAVGAKINYVKVKTFNQYTFLPVSVILAKDLVGKHFKAEAKDSSFEDYKG
GDKLIPWTITAEFTGKDLVGVVYHQLMPYVTNAELEAKAFRVIPADYVTTEDGTGIVHLA
AVFGADDFRVVKENDMPYVMVKDEQGNELPLVNKQGKFVDEVTDFAGYYVKEEYYSDEER
KAPDFKPTDVLIAIKLKEDNKAFDVKKYEHSYPHCWRTDKPILYYPLDSWFIKTTAVKDK
MVALNKTINWKPEATGTGRFGNWLENLVDWNLSRSRYWGTPLPIWRTQDGTEEKCIGSIA
ELNAEIKKSVEAGFMEAAFELKDMHRPFVDDVILTSSKGEKMTRELDLIDVWFDSGAMPY
AQWHYPFENQEEFENAYPADFIAEGVDQTRGWFFTLHAIAVMLSETSEEIKAVNERIGNQ
GIAYKNVVSNGLVLDKNGNKMSKRLGNGVDPFHTIDTYSADATRWYMISNASPWDNLKFS
TEGLDEVRRKFFGTLYNTYAFFALYANIDQFEIDENNETPVKDRSELDRWILSLLQNLIN
EVDESYNTYEPTKAARAIQTFVDEHLSNWYIRLSRRRFWKGEMTADKKAAYETLYTCLMS
VSQLMSPVAPFFADWLYQNLSVNKKTAEQSVHLSLWKEGDTSLIDIELNERMELAQNISS
MALSLRKKSSINVRQPLAKILLPVLDKTFQERVELVKEIILSETNIKDIEYITDTAGFIK
KKIKPNFKALGPKVGKDMKSVAETISGMSAEDLSKFEAEGSYLVPGTSYVILLEDVEIIA
EDIPGWQVTNIGKLTVALDVTITDVLKEEGLSRELINRIQNLRKELNFEVTDRITVSLQN
DNLIATAVAQNKTYICAEILADDINLITNLDKGNTIVIDEVELLISIAKQ
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtatagggaatttaaacaattagaactacctaagataggcgaagagatattacagttt
tggaaggaagaaaatatatttgaaaaaagtatttctacccgttcaaaagctaacccattt
actttttatgaaggcccgccttcagctaatggcatgcctggtattcaccacgtaatggct
cgtgctattaaagatattttctgtcgttataaaactctcaaaggtttccaggtgaagcgt
aaaggtggttgggatacgcatggtttgcctattgagcttgctgtagagaagaaactgggt
atcacgaaagttgatatcggtgttaaaattacagtagaggaatacaatgcagcctgccgt
gaagaagtaatgcgttataccgatatctggaatgaccttaccgagaaaatgggctattgg
gtagatctggagaaaccttatatcacttacgaaaatgaatatattgagtctctttggtgg
atcctgaaaaccttttatgataaagggcttttatataaaggatataccgtacagccttac
tctcctgctgcaggaacaggtttaagctctcatgagctgaaccaaccgggtacttataaa
atgttgaaagatacttcgatcactgcacagttcgctatcaaaagagaacagcagcatccg
gcattgtcttccatatttgaaaacgatacagaagatacgtcttttatcgcgtggacaact
acgccatggactttaccgtctaatggtgcactggcagttggcgcaaagatcaattatgta
aaagttaaaactttcaatcaatatactttcttaccggtcagtgtaatattggcgaaggat
ttagttggcaaacacttcaaagctgaagcaaaagatagctcttttgaagactataaaggt
ggtgataaactgattccgtggacaatcacagctgagtttactggtaaagacctggttggt
gtggtttatcatcagctgatgccttacgtaaccaatgctgaattagaagccaaagctttc
cgcgttatccctgctgactatgtaacgactgaagatggtacgggtatcgtacaccttgca
gctgtatttggagcagacgattttcgtgttgtaaaagagaacgacatgccttatgtgatg
gtgaaggatgaacaaggcaatgaacttcctttagtgaacaagcaggggaaattcgttgac
gaggttactgatttcgctggttattatgtgaaagaagagtattatagtgatgaagaacgt
aaagcgcctgatttcaagcctacagacgtcttgatcgcgattaaactgaaggaagacaat
aaagcgttcgacgttaaaaaatacgaacacagttatccgcattgctggagaactgacaaa
cctattttatactaccctctggatagctggtttattaaaactactgctgtaaaagataaa
atggtagcactgaacaaaaccattaactggaaaccggaagctacaggaacaggccgtttt
ggtaactggctggaaaacctggtggactggaatttatcgcgctcccgttattggggaact
cctttaccaatctggagaactcaggatggtacggaagaaaaatgtattggttctattgca
gagctgaatgcggagatcaaaaagtctgtagaagctggttttatggaagctgcttttgaa
ttgaaagatatgcaccgtccttttgtggatgatgtgatcctgacttcttcaaaaggcgaa
aaaatgacccgtgaactggatctgatcgatgtatggtttgatagtggtgcaatgccttat
gcacaatggcattacccttttgaaaaccaggaagagtttgagaatgcctatcctgcagat
tttatcgctgaaggtgtggaccagacccgcggatggttctttactttacatgcgattgct
gtcatgctgagtgaaaccagcgaggagatcaaagcagtaaatgagcgtattggcaaccaa
ggtattgcttataaaaatgtagtttccaatggattggtactggataagaacgggaacaaa
atgtctaagcgtttgggcaatggagttgatcctttccatacgattgatacttacagtgct
gatgcaaccagatggtatatgatcagtaatgcttctccatgggataacctgaagttcagt
actgaaggcctggatgaggtaagacgtaagttttttggaacattatacaatacttatgct
ttcttcgctttatatgcgaacattgatcaatttgagattgatgaaaataacgagacacct
gtaaaggaccgttctgaattagacagatggattttatcgctgttacagaacctgatcaac
gaggtggatgagagttataatacttatgagcctactaaagcagcgagagctattcagact
tttgtagatgagcatttaagtaactggtatattcgtttatcacgccgccgcttctggaag
ggtgaaatgactgcggataaaaaggctgcttatgagactttatatacttgtttgatgagc
gtatctcagttaatgtctccggttgcacctttcttcgcggattggttataccagaactta
tcagttaataaaaaaactgctgaacagtcggtccatttgagcttgtggaaagagggtgat
acctcactgatcgacatagaattgaatgagcgtatggagcttgcccagaatatttcttct
atggcactttccttaaggaagaaatcaagcatcaatgtgcgtcagccgctagctaagatc
ttattgcctgtactggacaaaacgttccaggaaagagtggaacttgtgaaggaaattatc
ttatctgagactaacatcaaggatattgaatatatcactgatactgctggtttcatcaag
aaaaagatcaaaccgaatttcaaagcgctcggaccaaaggttggtaaggacatgaaatcg
gtagcagaaacaattagtgggatgagtgctgaagatttaagcaagtttgaggcggaaggt
tcttatcttgttccgggtaccagctatgtaattttgctggaggatgtagaaatcatcgct
gaggacatacctggatggcaggtaacaaatatcggaaagcttacggttgctttggatgtt
acgataaccgatgtgttgaaagaggaaggtttatcacgtgaattgatcaacagaatccag
aatttaagaaaggagcttaatttcgaagtgactgatcgcattaccgtgagtttacaaaac
gataatttaatcgccacagcagtagcacagaataaaacatacatttgcgctgaaatatta
gcggatgatattaatttgataactaatttagataaaggaaacacaatcgtaattgatgag
gttgaattactgatttcaattgcaaaacaataa
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