Pedobacter cryoconitis: AY601_4248
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Entry
AY601_4248 CDS
T04341
Name
(GenBank) RND transporter
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm01501
beta-Lactam resistance
pcm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AY601_4248
01503 Cationic antimicrobial peptide (CAMP) resistance
AY601_4248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcm03036
]
AY601_4248
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcm02000
]
AY601_4248
01504 Antimicrobial resistance genes [BR:
pcm01504
]
AY601_4248
Chromosome and associated proteins [BR:
pcm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
AY601_4248
Transporters [BR:
pcm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AY601_4248
Antimicrobial resistance genes [BR:
pcm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AY601_4248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
VWA_N
Peptidase_M23
PTS_EIIA_1
RnfC_N
DUF2524
Motif
Other DBs
NCBI-ProteinID:
AMQ01097
UniProt:
A0A127VIF5
LinkDB
All DBs
Position
4963111..4964187
Genome browser
AA seq
358 aa
AA seq
DB search
MKAIHYAALLLGVPIFYACNTSTPVASTAMGNDTIPVQVMKLNLESSNAAIPVSGQFTTN
NEVMLSFKTGGIINSLLVKEGDAVKKGQLLATLNLTEINAQVQQAQLGYEKAKRDYQRTK
NLYTDSVATLEQLQNSKTALLVSQQQLNQVDFNRKYSEIHAPENGFILKKMADVGQQISS
GTAVLQTNGAQSGKWELKVGISDREWAILKLNDPAKIETTAMPGQVLDGVVSRKSEGVDA
ATGTFTAYIKLTGQTPKAIAAGMFGKATLSPSKHVEHKGNWQIPYEALLDGDGSSGYVFV
TNDNKTAHRVKVTVAGIEKNTVTISEGLENAGALIISGSAYLTDNSKISIHSPLKTAK
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctattcattatgctgcgctattgctgggagtaccgatattttacgcttgcaat
acctcaacgccagttgccagcacggcaatgggaaacgatacgatcccggttcaggttatg
aaacttaacctggaaagcagtaatgctgcaatcccggtatccggacaatttacaacgaac
aatgaagttatgctctcctttaagacgggcggaattataaacagcctgctggttaaagag
ggggatgcggttaaaaaagggcaattgctcgcaactttgaacctcacagagatcaatgca
caagtgcagcaagctcaactgggctatgaaaaggccaaacgtgattatcagcggacaaaa
aacttgtatactgatagcgtagctactttagagcaattgcaaaatagtaaaactgcgctg
ctggtttctcagcagcaactcaatcaggttgattttaacaggaaatattcagagatacat
gcgccagaaaatggctttattttaaaaaagatggctgatgtaggccagcagatttcttct
ggtactgctgtattacaaaccaacggggcacaatccgggaaatgggagttaaaagtaggg
atcagcgacagggaatgggcgattttaaaattaaatgatccggcgaaaatagagaccact
gctatgccgggacaggttctggacggagtagtgagccgtaagtctgaaggggtcgatgca
gctaccggaacgtttacagcttatattaagttaacgggacagacgccaaaagctattgct
gccggcatgtttggaaaagcaacgctaagtccttcaaaacacgtggagcataaaggaaac
tggcaaataccatacgaggcattgttagatggtgacggaagcagcggttatgtatttgtt
accaatgataacaaaactgcacatagagtaaaagtgacggttgcgggaattgaaaaaaac
acggtaactatcagtgaggggttggagaatgctggggcattaattatttccggatcagcg
tatttgacagataacagcaagatcagtattcattcaccattaaaaacagcgaaatga
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