Pedobacter cryoconitis: AY601_4695
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Entry
AY601_4695 CDS
T04341
Name
(GenBank) 2-oxoglutarate dehydrogenase E1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00020
Citrate cycle (TCA cycle)
pcm00785
Lipoic acid metabolism
pcm01100
Metabolic pathways
pcm01110
Biosynthesis of secondary metabolites
pcm01120
Microbial metabolism in diverse environments
pcm01200
Carbon metabolism
pcm01210
2-Oxocarboxylic acid metabolism
Module
pcm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AY601_4695
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AY601_4695
Enzymes [BR:
pcm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
AY601_4695
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Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
E1_dh
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AMQ01525
UniProt:
A0A127VJM8
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All DBs
Position
5478090..5480885
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AA seq
931 aa
AA seq
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MDNLSYLNGANAEYIDSIYQAYKEDPNAVEFGWQKFFEGFDFGRGADAGVASEATPEHFL
KEVSVLNLINGYRQRGHLFTQTNPVRERRHHLPTLDIENFGLSQADLDTVFNSSVELGIG
AAKLSDIVTFLKRTYCRSIGAEYKFVRTPEVLSWIENKMESVQNTPNFSIEEKRRILKKL
NEAVSFENFLGTKFLGQKRFSLEGAEALIPALDSVIEKGSAMGIEEFVIGMAHRGRLNVL
ANIMQKTYKDIFAEFEGKGYSAESPFGGDVKYHLGYSTDVTTNDGKSVHLSLCPNPSHLE
TVNGVVEGMTRSKIDFKYGGDDSRIAPILIHGDASVAGQGIVYEVIQMAGLDGYKTGGTI
HLVINNQIGFTTNYKDGRTSTYCTDIAKVTLSPVFHVNGDDVEALVYAINLAMEYRQKYK
NDVFIDILCYRRFGHNEADEPKFTQPLLYKSIEQHANPRDIYIKQLIGEGKMEASLAKEM
EVEFRGILQERLNEAKEVTSTYKGVKFAGAWSDMRIASAEDFVTSPDTSVKKTTLLEIAK
RISTLPADKKFFKKIEKLFAERNKMATSSHVFDWAMGEQLAYATLLTEGKRVRLSGQDVE
RGTFSHRHAVLTLEDSEEEYIPLSNLSDQQAPFDIYNSHLSEYGVLGFEYGYAMANPNAL
TIWEAQFGDFFNGAQIVVDQYIASAETKWQRENGLVMLLPHGYEGQGPEHSSARIERFME
LCADYNMQVTNCTTPANFFHAIRRQFKRDFRKPLIVFTPKSLLRHPLCVSKLEEFTNGKF
QEVINDANVKANEVDRVLFCSGKIYYELLEKQQKEEIKNVAIVRVEQLYPTPFKQMEEVY
KGYKNAKEAVWVQEEPENMGAWPYLLRKTRKTVFSDIEVISRKESSSTATGFAKQHADEQ
AYILAKSFAAPVTEVDQKIAKKSVSKAYNVD
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggataatttatcttatctcaacggcgcaaatgccgaatacatcgattctatttatcaa
gcttataaagaagatcctaatgcggttgaattcggctggcagaagttttttgaagggttt
gattttggaagaggagcggatgctggcgtagccagtgaagcaactcccgaacatttttta
aaagaagtgagtgtcttaaatctgatcaatggttatcgccagcgcggtcatttgtttacc
caaacaaatccggtaagagaaagacgtcatcatttaccaactcttgatatcgaaaacttt
ggtttgagtcaggctgacctggacaccgtttttaattcgagcgtagaacttggtattggt
gctgccaaactaagcgatatcgtaacctttctgaagagaacttactgcaggtctattggt
gcggaatataaatttgtccgtacacctgaagtattaagctggattgaaaataaaatggaa
agtgtgcagaacacgccaaatttttcaattgaagagaaaagaaggatccttaaaaagtta
aatgaagcggtaagctttgagaacttcttaggaactaagtttcttggtcagaagagattt
tctttagaaggggctgaggctttaattcctgcactggattcagtaattgaaaaaggttct
gcaatgggaattgaagaatttgtaattggtatggcacacagagggcgtttaaatgtgctg
gccaatatcatgcaaaaaacttacaaagatatctttgctgaatttgaaggtaagggctac
agtgcggaatctccttttggaggtgatgtgaagtaccaccttggttattctacggatgta
actacgaatgacggaaaaagcgtccatttgagtttatgtcctaacccatctcacctggaa
acagtaaatggtgtggttgaaggaatgacacgttctaaaatcgatttcaaatatggtggg
gatgattcacgtattgcgcctatcctgattcatggtgacgcttcggttgccggacagggg
atcgtttacgaagttattcaaatggcaggtctggatggttataaaaccggtggtacgatc
cacctggtgattaacaaccagattggttttactacaaattataaagacggccgtaccagt
acctattgtacagatattgctaaggtgacgctttctcctgttttccatgtgaatggagat
gatgtagaagctttggtttatgcgatcaacctggctatggaataccgtcagaaatataaa
aatgatgttttcatagatattctgtgttaccgcagattcgggcataatgaagcagatgag
cctaaattcactcagcctttattgtacaaaagcatcgagcagcatgctaatccaagagat
atctatatcaaacaactgattggtgaaggtaaaatggaagcaagcctggcaaaagaaatg
gaagttgaattccgtggtattttacaggagcggttaaatgaagcgaaagaagttacttct
acttataagggagtgaaatttgctggtgcatggtcagacatgagaattgccagtgcagaa
gattttgttacttctcctgatacgtctgttaaaaagactactttattagagattgcaaaa
aggattagtactttgcctgcagataaaaagttcttcaagaaaattgagaaactatttgct
gagcgtaataaaatggctacttcaagtcatgtttttgactgggcaatgggtgagcagctg
gcttatgcaactttacttactgaaggtaagagagttcgtttaagcggacaggatgtagag
cgtggtacattctcacatcgtcatgctgttttaactttagaagattctgaagaggaatat
atccctttaagtaacctttctgatcagcaggccccatttgatatctataattcacattta
tctgaatatggcgttttagggtttgagtatggttatgcaatggcaaaccctaatgcttta
actatttgggaagcgcagtttggtgatttctttaatggtgcacaaattgttgtggatcaa
tatattgcaagtgcagaaacaaaatggcagcgtgaaaacgggttagttatgttattgcct
catggttatgaaggacaagggcctgaacactcttctgcaaggattgagcgttttatggaa
ctttgtgcggattacaatatgcaggtaactaactgtactactcctgctaactttttccat
gcaatccgtcgtcagtttaaacgtgatttcagaaaaccattaattgtttttacccctaaa
agcttattgcgtcatcctttatgtgtttctaagctggaagaatttactaatggaaaattc
caggaggtaatcaatgatgcaaatgttaaagcgaatgaggtagacagagtattgttctgc
agtggtaaaatttactacgaattgttagagaaacaacagaaagaggagatcaaaaatgtt
gcgatcgttcgtgttgagcagttatatcctacgccatttaaacaaatggaagaagtttat
aaaggttataaaaatgcgaaagaagctgtttgggttcaggaagaacctgaaaacatgggt
gcatggccttatttgttgcgtaaaacaagaaagacagtatttagtgatattgaagtgatt
tcaagaaaagaaagcagcagtactgcaactggatttgcgaaacagcatgcggatgagcaa
gcttatattctggcaaaatcttttgcagcacctgtaactgaggtggatcagaaaattgct
aagaaatcagtgagtaaagcatataacgtagattag
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