Pedobacter cryoconitis: AY601_4708
Help
Entry
AY601_4708 CDS
T04341
Name
(GenBank) RND transporter
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm01501
beta-Lactam resistance
pcm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AY601_4708
01503 Cationic antimicrobial peptide (CAMP) resistance
AY601_4708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcm03036
]
AY601_4708
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcm02000
]
AY601_4708
01504 Antimicrobial resistance genes [BR:
pcm01504
]
AY601_4708
Chromosome and associated proteins [BR:
pcm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
AY601_4708
Transporters [BR:
pcm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AY601_4708
Antimicrobial resistance genes [BR:
pcm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AY601_4708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
YknX_C
BSH_CzcB
RND-MFP_C
BSH_YknX
Beta-barrel_RND_2
BSH_CusB
Beta-barrel_YknX
Biotin_lipoyl
HH_MFP_RND
RnfC_N
MGAT4A_C
CzcB_C
LcnD_C
PTS_EIIA_1
BSH_LcnD
BSH_RND_rel
SecG
BSH_YhbJ
Peptidase_M23
HH_EMRA
Insulin_TMD
YxzE
Motif
Other DBs
NCBI-ProteinID:
AMQ01537
UniProt:
A0A127VJP3
LinkDB
All DBs
Position
complement(5497794..5498858)
Genome browser
AA seq
354 aa
AA seq
DB search
MKRGIITVILIIVVIGAIALVLKNNKKKNDAQTALVAQGSGAISVRVAPVKKVAVDLDFS
ANGNFIPKKELNFLSENAGRITKIYVEEGDRVHKGQILAHIDAEIINTDKETAQAALDNA
IRDEARYVSSFKTGGVTQQQLDQAKLATRNAKLRLQGSARRVSDANIKSPIDGIVNKKYI
ETGAFVTAQGTQLFELVDVSKLKLKVNVNEGQVANLKVGETVQIKSNVFPSDNFSGKITF
IAAKADETLNFPIEIEVDNNHKNTIKAGMYGTAIFKFPAQVATITIPRGSFVGSVSSNEV
FVLGEGNTAKQRKVVAGRIIGDQVEILDGLKEGETVIISGQINLVDGSPVAIIK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaggaattataacagtcattctaattatagttgttatcggagctattgctttg
gtacttaaaaacaataagaagaaaaatgacgcgcaaacggctttggtagctcagggaagt
ggtgctatcagtgtacgcgtggctccagtgaaaaaagtagccgttgatttggattttagt
gcaaatggtaattttataccaaaaaaagaattgaactttttgtcagaaaatgcaggccgt
atcacaaaaatatatgtagaagaaggcgaccgcgtacataaaggacagattttggcacat
attgatgctgagattatcaatacagataaagaaactgcacaagctgcattagacaatgcg
atcagagatgaagccagatatgtaagctctttcaaaactggtggtgttacacaacagcaa
ctcgaccaggcaaaactggctacaagaaatgcaaaactaagactacaaggttctgcaaga
agagtaagtgatgcgaatatcaaatctccgattgatggtatagtgaataagaaatacatt
gagaccggtgctttcgttacagcacagggtacgcagttgtttgaactggttgacgtttca
aagttaaaattgaaagtgaatgtaaacgaaggacaggttgctaaccttaaagtaggtgaa
accgtacaaattaaatcaaatgtattcccttctgataacttctcaggtaaaattactttc
atcgctgctaaagcagatgaaacgttaaatttccctattgaaattgaagtggacaataac
cacaaaaacactatcaaagcagggatgtacggaactgccattttcaagttcccggctcag
gtggcaaccattactattccccgcggttcatttgtgggtagtgtaagcagtaacgaagtt
ttcgttcttggggaaggaaatacagcaaaacaacgtaaagtagttgcaggcagaattatt
ggtgatcaggtagaaattcttgatggcctgaaagaaggtgaaacagtaatcatcagcgga
cagatcaatttagttgatggcagccctgttgcaattataaaataa
DBGET
integrated database retrieval system
