Pedobacter cryoconitis: AY601_5008
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Entry
AY601_5008 CDS
T04341
Name
(GenBank) 3-isopropylmalate dehydratase small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00290
Valine, leucine and isoleucine biosynthesis
pcm00660
C5-Branched dibasic acid metabolism
pcm01100
Metabolic pathways
pcm01110
Biosynthesis of secondary metabolites
pcm01210
2-Oxocarboxylic acid metabolism
pcm01230
Biosynthesis of amino acids
Module
pcm_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
AY601_5008
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
AY601_5008
Enzymes [BR:
pcm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
AY601_5008
4.2.1.35 (R)-2-methylmalate dehydratase
AY601_5008
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Motif
Pfam:
Aconitase_C
LeuD
DUF7127
Motif
Other DBs
NCBI-ProteinID:
AMQ01824
UniProt:
A0A127VKH1
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All DBs
Position
complement(5865795..5866379)
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AA seq
194 aa
AA seq
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MRKFEKLTSAIVPLNIENIDTDQIIPARFLKATTREGFGENLFRDWRYNGDNTLKADFVL
NDPAYGGQILVAGKNFGCGSSREHAAWAIQDAGFDVVISSFFADIFKGNALNNGLLPIQV
SEDFLSAIYTAVGKNHKAQLDVDLEKQTVTIVDSGEQVDFEINAYKKSCLINGYDDIDFI
LNQKHLIAAFEQAK
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaattcgagaaactaacatcggcaattgtgcctttaaacatagaaaatattgat
actgaccagatcattccggccaggttcctgaaagcgacaacccgtgaaggtttcggtgag
aacctgttccgcgactggcgctacaatggggacaatacattaaaagctgattttgtactg
aatgaccctgcttatggtggtcagattttagtcgcaggaaagaactttggttgtggcagc
agccgtgaacacgcagcatgggctatccaggatgcaggttttgatgtagtgatcagcagt
ttctttgctgatatcttcaaaggaaatgctttaaacaatggtttgttacctatccaggtc
agtgaagacttcttatctgcaatttacactgcggtgggtaaaaatcacaaagcacaattg
gatgtcgatctggaaaaacaaaccgtaactattgtagatagcggtgaacaagtcgatttt
gaaatcaatgcctataaaaaatcatgcctgattaacggctacgatgacatcgactttatc
ttaaaccaaaaacatttgatcgcagcattcgaacaagcaaaataa
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