Phanerochaete carnosa: PHACADRAFT_253837
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Entry
PHACADRAFT_253837 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
pco
Phanerochaete carnosa
Pathway
pco03420
Nucleotide excision repair
pco04111
Cell cycle - yeast
pco04120
Ubiquitin mediated proteolysis
pco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PHACADRAFT_253837
04120 Ubiquitin mediated proteolysis
PHACADRAFT_253837
09124 Replication and repair
03420 Nucleotide excision repair
PHACADRAFT_253837
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
PHACADRAFT_253837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pco04121
]
PHACADRAFT_253837
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_253837
Enzymes [BR:
pco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
PHACADRAFT_253837
Ubiquitin system [BR:
pco04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
PHACADRAFT_253837
Multi subunit type E3
SCF complex
Ring finger protein
PHACADRAFT_253837
Cul2 complex
PHACADRAFT_253837
Cul3 complex
PHACADRAFT_253837
Cul4 complex
PHACADRAFT_253837
Cul7 complex
PHACADRAFT_253837
Cul8 complex
PHACADRAFT_253837
Cul9 complex
PHACADRAFT_253837
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
PHACADRAFT_253837
TCR (transcription coupled repair) factors
Cul4-CSA complex
PHACADRAFT_253837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
18915894
NCBI-ProteinID:
XP_007394466
JGI:
Phaca1_253837
UniProt:
K5WC89
LinkDB
All DBs
Position
Unknown
AA seq
117 aa
AA seq
DB search
MADMDVDVPDEIEPKVKGKAGEDSKGGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMD
LCIECQANQVSATNDECNAAWGICNHAFHFHCISRWLKTRNVCPLDNREWELQKYGR
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggctgacatggatgttgatgtccccgacgagattgagcccaaggtcaagggaaaggcc
ggcgaggacagcaagggcggcaagaagcgattcgaggtcaagaagtggaacgctgtagcg
ttatgggcatgggatatcgtcgtcgacaactgcgccatctgcaggaatcacatcatggac
ctctgtattgagtgccaagcgaaccaggtatccgccactaacgacgagtgtaatgccgca
tgggggatttgtaatcacgcctttcacttccattgcatctctcgatggctcaaaacccgt
aacgtatgtcctctggacaatcgggagtgggagctgcagaaatacggccgatag
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