Pectobacterium colocasium: PJ912_20050
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Entry
PJ912_20050 CDS
T08961
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa01501
beta-Lactam resistance
pcoa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PJ912_20050
01503 Cationic antimicrobial peptide (CAMP) resistance
PJ912_20050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcoa03036
]
PJ912_20050
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoa02000
]
PJ912_20050
01504 Antimicrobial resistance genes [BR:
pcoa01504
]
PJ912_20050
Chromosome and associated proteins [BR:
pcoa03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PJ912_20050
Transporters [BR:
pcoa02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PJ912_20050
Antimicrobial resistance genes [BR:
pcoa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PJ912_20050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CusB_dom_1
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
WED68244
LinkDB
All DBs
Position
complement(3852873..3854066)
Genome browser
AA seq
397 aa
AA seq
DB search
MNKNRRLTPLAAVLMLSGGLMLAGCDGGNNQQGGAQQQMPEVGIVTLKTEALNVMTELPG
RTSAYRIAEVRPQVGGIVLKRNFVEGSDVKAGASLYQIDPATYQASYNSAKGSLAQAQAQ
AEIARLTVNRYKPLLGTNYVSKQDYDQAVATSRQADAAVQAAKAAVDTAQINLAYTKVSS
PIEGRVGKSTVTEGALVATGQATALTTVQQLDPIYVDVTQSSNDFLQLKRELENGTLKQS
AGKANVRLLLENGTEYTEAGTLEFSDVTVDETTGSITLRAIFPNPQHNLLPGMFVRARLD
SGVNPTALLVPQQGVTRDPRGQATAMVVGEGDKVEPRTLTTSKAIGDKWLVTEGLKAGDR
VIVTGLQKIRPGAQVKTKEVAQENQQAQQAPAEPAKS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacagaaggctaacgcctctggcggcagttctgatgctttctggcggctta
atgctcgcaggatgtgatggcggcaataatcagcaaggcggcgcacagcagcagatgcct
gaagtgggtattgtcacgttaaaaacggaagcactgaatgtcatgaccgagctgccgggc
cgtacaagtgcttaccgcattgccgaggttcgcccgcaggttggcggtattgtcctcaag
cgcaacttcgttgaaggatctgacgttaaagccggtgcatcgctgtatcaaatcgatcct
gcgacctatcaggcaagctacaacagcgctaaagggtcactcgctcaggcccaggcccag
gctgaaattgcccgtctgaccgttaaccgctataaaccgctgttgggcaccaactacgtc
agcaagcaggattacgatcaggccgttgccacttctcgtcaggctgatgcggccgttcag
gctgccaaagcagcggtagacaccgcacaaatcaatctggcttacaccaaagtcagttca
cctatcgaaggccgcgtaggtaaatccacggtaacggaaggcgccttggtggcaaccggg
caagcgacggcattaacgaccgtgcaacagcttgatccgatctatgttgacgtcacacag
tccagcaacgatttcctgcaactaaaaagagagctggaaaacggcacgctgaaacaaagt
gcaggcaaagccaatgtccgcctgctgctggaaaacggtactgaatataccgaggcaggt
acattggaattctctgatgtcacggtagatgaaaccaccggctccatcacgctgcgcgcc
attttccctaacccacagcacaacctgcttcctggtatgtttgtacgcgcacgtctcgat
tccggcgttaacccgacggccttattagtgccgcagcagggtgttactcgcgacccgcgt
ggccaggctaccgcgatggtagttggggaaggcgataaagtggaaccccgtacgcttaca
accagtaaagcaattggtgacaaatggttggttaccgaaggcttgaaagcgggcgatcgc
gttattgttacgggtctgcaaaaaatcagacctggtgcacaggtgaaaactaaagaagtc
gctcaagaaaatcagcaggcacagcaagcgccagcagaacccgcgaagtcttaa
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