Pectobacterium colocasium: PJ912_25480
Help
Entry
PJ912_25480 CDS
T08961
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PJ912_25480 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoa03400
]
PJ912_25480 (nth)
Enzymes [BR:
pcoa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PJ912_25480 (nth)
DNA repair and recombination proteins [BR:
pcoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PJ912_25480 (nth)
Prokaryotic type
PJ912_25480 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WED68745
LinkDB
All DBs
Position
complement(4938265..4938900)
Genome browser
AA seq
211 aa
AA seq
DB search
MNKAKRIEILTRLRANNPHPTTELNFSTPFELLIAVLLSAQATDVSVNKATAKLYPVANT
PEAMLELGVDGVKDYIKTIGLFNSKAENVIKTCRLLLEKHQGQVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTGFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI
LHGRYTCIARKPRCGSCLIEDLCEFGEKIDA
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagccaaacggattgagattttaacgcggttgcgtgccaacaatccccatcca
acaacggagttaaatttcagcacgccgtttgagctgctcatcgccgttctgctttctgca
caggcgaccgatgtcagcgtcaacaaagcaacagcaaaactctatcccgtcgcgaatacg
ccggaagccatgcttgagctcggcgtagacggcgtgaaagactacatcaagaccatcggc
ctgtttaacagcaaagcggaaaacgtcatcaaaacctgccgtctgttgctggaaaagcat
cagggccaggttcctgaagatcgcgcggcgctggaagccttgcccggcgtcgggcgaaaa
acggcaaatgtggttctgaataccgcgtttggctggccgaccattgccgttgatacccac
atctttcgcgtcagcaaccgtacagggtttgcgccgggtaaaaatgttgaacaggtagag
gaaaaactgctgaaagtcgttccggcagaatttaaagtcgactgccatcactggttaatc
ctgcatggtcgttacacctgcatcgcacgcaaaccacgctgtggttcctgcctgattgag
gatttgtgcgagtttggcgagaagatcgacgcttaa
DBGET
integrated database retrieval system
