Pseudophryne corroboree (corroboree frog): 134968874
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Entry
134968874 CDS
T11513
Symbol
BDNF
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134968874 (BDNF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pcob04052
]
134968874 (BDNF)
Cytokines and neuropeptides [BR:
pcob04052
]
Cytokines
Growth factors (RTK binding)
134968874 (BDNF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
NTF3_N
Spaetzle
Motif
Other DBs
NCBI-GeneID:
134968874
NCBI-ProteinID:
XP_063800484
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All DBs
Position
11:complement(71298399..71393658)
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AA seq
256 aa
AA seq
DB search
MFHQVRRVMTILFLTMVISYFSCMKAAPMKEASVRGQSGLAYPGLRTHGTLESIGGPVSS
SRGGGLPSLTDTFEHVIEELLEEEQNIRQSEENKDSDLYSSRVMLSTQVPLEPPLLFLLE
EYKNYLDAANMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMAGQTVTVLEKVP
VPKGQLKQYFYETKCNPMGYMKEGCRGIDKRYWNSQCRTTQSYVRALTMDSKKKVGWRFI
RIDTSCVCTLTIKRGR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgttccatcaggtgagaagagtaatgaccatccttttccttactatggttatttcatac
ttcagttgcatgaaagctgcccccatgaaagaagccagtgtcagaggacaaagtggcctg
gcgtatccgggtcttcggacccacggtactctggagagcataggtgggccagtgagcagt
tcaagaggaggaggacttccatccctaacagatacctttgaacatgtcatagaggaactc
ctagaagaggaacaaaacataaggcagagtgaggagaacaaggattccgatttgtattca
tcaagagttatgctgagcactcaagtgcctttggagcctcctttgcttttccttctcgag
gagtacaaaaactacctggatgctgcaaacatgtctatgagggtgcggcgccactcagac
ccagccagacgtggggaactgagcgtgtgtgacagtattagtgagtgggtgactgcagca
gacaagaaaactgcagtggacatggcggggcaaacagttactgttcttgaaaaagtccca
gtacccaagggtcaactgaaacaatatttctatgagaccaaatgcaatcctatgggctac
atgaaggaaggttgcaggggcatcgacaagaggtattggaactcgcaatgccgaactacc
cagtcttatgtgcgcgctctcactatggatagcaaaaaaaaagttggttggcgctttata
aggatagacacttcttgtgtatgtacactgaccattaaaagaggaagatag
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