Pseudophryne corroboree (corroboree frog): 135055422
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Entry
135055422 CDS
T11513
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pcob Pseudophryne corroboree (corroboree frog)
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcob04040
]
135055422 (SCN4A)
Ion channels [BR:
pcob04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
135055422 (SCN4A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
135055422
NCBI-ProteinID:
XP_063815535
LinkDB
All DBs
Position
3:complement(316596942..316872840)
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AA seq
1812 aa
AA seq
DB search
MAAKKLPAGPDSLRRFNRESLAKIEKRIEEEQIRKAKQIEVLDEDILKPNNGLEVGKNLP
LIYGDPPSELIGVPLEDLDPFYGNQKTFIVLNKGKAIFRFSATKALYLLDPFNPLRTGAI
KVLIHSIFSFFIMITILTNCVFMTMSDPPSWSKNVEWTFTGIYTFESLIKIFSRGFCIDS
FTFLRDPWNWLDFCVIVMAYTTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLAVFALIGLQLFMGNLRQKCVRWPPPEDAYEYFRNETLSSMSAVY
NDTDMYENITIDWTPYFNNLSNFYFLEGALDPLLCGNSSDSGKCPESFTCMKTGINPNYG
YTSFDSFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMVFFVLVIFLGSFYLINLILAV
VAMAYDEQNEATIQEALEKEREFQDLLEQLRKHQEEQGQRKESVASVGLLNEENKKSPSQ
QDLADDDTDKRDCNGRIIPRVVVEKITSQEDDASSVKTDLEKNSKMYLEEPTLLKKTRSS
VSVVSDAMLEELEEAQQTCPPWWYKFSNRFLIWDCCALWVKFKGCVRFVVMDPFVDLGIT
ICIVLNTLFMAMEHYPMTEQFEQVLSVGNLVFTGIFAAEMVFKIIALDPYYYFQVGWNIF
DSIIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTL
VLAIIVFIFAVVGMQLFGKSYKECVCKINSDCVLPRWHMHDFFHSFLIVFRILCGEWIET
MWDCMEVAGQAMCLVVFLMVMVVGNLVVLNLFLALLLSSFSADNLSASDDDGEMNNLQIA
IGRITRGIDFLKKIVLSIVPFKKKATKEDEGEDVNKESFALNHVETEEEPKTECPIVDGL
VKKQRYIMNEFDHINLINNPHYRIEVPIASEESDLDVPDTDELSTQSELDEAIIRPKRTF
DDDYSECSTVDYKPPDPEKEEDALEHKEEDGPEQCFTDACIRRFPFLNVDITTEKGKLWW
NIRKTCFKIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKVIRTMLEYADKVFSYVFVI
EMLLKWTAYGFKVYFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALRPLR
ALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYKCINSTTSEMF
DTSVVNNRSDCFALNYTEEVRWVNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRD
IEDQPEYEVNLYMYLYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKK
YYNAMKKLGSKKPVKPIPRPENPVQGVVFDFISKQAFDIVIMILICLNMVTMMIETDDQS
QQKIDILFNINLVFIVIFTAECVLKMFALRYYFFTIGWNIFDFVVVILSIAGIVLSDLIA
EYFVSPTLFRVIRLARIGRVLRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSI
FGMSNFAYVKKESGIDDMFNFETFGNSMICLFMITTSAGWDGLLNPILNSSPPDCDPHLE
NPGTAVHGNCGNPSMGIMFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLCEDDFE
MFYETWEKFDPDATQFVEYSRMSDFVDTLQEPLRIPKPNRIKLITMDLPMVTGDKIHCLD
ILFALTKDVLGDSGEMDALKASMEEKFMAANPSKVSYEPITTTLKRKQEEVSAIKIQRAF
RRHLLKRSVKQASYVYRHSQDLDSTVNELPEKEGLVAERISLAYDQYVEEGGTNGAQKSR
STNRYSRSSGDD
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaagaagcttcctgccggccctgacagcctgcggcgatttaacagagagagc
cttgcaaaaatagaaaagcgaattgaagaagagcagatccggaaagctaagcagattgaa
gtgcttgatgaagatatactaaagcctaacaatggcctagaagttggaaaaaatctacca
cttatatatggtgatcccccatcagaactgattggtgtgcccctagaggatctggatcct
ttctatggaaaccaaaagacattcattgtcctgaataagggcaaagcaatatttcggttc
tctgctaccaaagctttatatctactggaccctttcaatcctttgagaactggggctatt
aaagtgctgatccactcaatattcagtttttttattatgataacaatcttaacaaattgt
gtctttatgaccatgagtgacccaccttcctggtccaaaaatgtggagtggacatttaca
ggcatttatacttttgagtctttgataaagatcttttcccgagggttttgcatcgacagt
tttacattcctcagggatccctggaattggctggatttctgtgtcattgtcatggcttac
accacagagtttgtagatttggggaatgtgtctgctcttaggacattccgtgtcctccgt
gcacttaaaacaatcactgtaattccaggtctgaagaccattgtcggagccctcattcag
tcagtgaaaaagttgtccgatgtgatgattctgactgtattctgtctggctgtctttgca
ctaattggtcttcaactgtttatgggaaatctgaggcagaagtgcgtccgatggccaccc
cctgaagacgcctatgaatatttccgaaatgagaccttaagctctatgtcggctgtttac
aatgacacagacatgtacgaaaatataactatagactggactccctacttcaacaatctg
tcaaacttttacttcctggaaggcgcattggaccctcttttatgtgggaacagcagcgac
agtgggaaatgcccagaaagttttacatgtatgaaaactggcataaatcccaactatggg
tacaccagctttgactcattcagctgggcttttttggctctcttcaggctgatgactcag
gactattgggagaacctctttcagctgaccctccgagcagctggtaagacatacatggtt
ttctttgtgttggtgattttcctgggctcattctatcttatcaaccttatcctcgctgtt
gtggccatggcttatgatgagcagaatgaagccaccattcaggaagccttagaaaaggag
agagaatttcaggatctactggaacagcttaggaaacatcaggaggagcagggtcaacgg
aaagagagtgtggcatctgtggggcttcttaatgaagaaaataagaaatcaccctcccaa
caagacctagcagatgatgacacagacaagagagactgcaatgggagaataatacccaga
gtggtggttgaaaaaatcacttctcaagaagatgatgcaagttcagttaagacggatctt
gagaaaaattccaaaatgtatctggaggaaccaaccttgctgaagaagacaaggagctca
gtcagtgttgtttctgatgccatgttagaagagctagaggaagcccagcagacatgccca
ccctggtggtacaagttttcaaataggttcctgatttgggactgctgtgctctatgggtg
aagtttaagggatgcgtgcggtttgtggtaatggatccctttgtagaccttggcatcact
atctgcattgttctcaatacgcttttcatggctatggagcattatccaatgactgagcag
tttgagcaggtgctgtctgtgggaaacctagtgttcactggcatttttgcagctgaaatg
gtctttaagatcattgctttggatccttattactatttccaggtgggatggaacatattt
gacagcattatagtcactctgagcttggtggagctgggtctggccaatgtggaaggtctg
tcagtgctgcgttctttccgtctgctccgggtcttcaaacttgccaaatcttggcccacg
ctaaacatgcttatcaaaatcattggtaactctgtgggggctctagggaacctcactctt
gtcctggccatcattgtattcatctttgcggtggttggaatgcagctttttgggaagagc
tacaaagagtgtgtttgcaagattaattcagactgtgtgcttccacgatggcacatgcat
gacttcttccattctttcctcattgtgttccggatcctgtgcggagagtggatcgaaacc
atgtgggattgcatggaggtagcagggcaagctatgtgcctggttgtcttcttgatggtc
atggtggtgggaaacttggtggtgctaaatctttttctggccttgttgctgagttccttt
agtgctgacaacctgtctgcctctgatgatgatggagagatgaataacctacagatcgcc
atagggagaataaccaggggtatagactttttgaaaaaaatcgtcctgtccattgtgcca
tttaaaaaaaaggcgacaaaggaagatgagggtgaggatgtaaacaaagagagctttgct
ctaaatcatgtagagactgaggaggagcccaagactgaatgtccaattgttgatggtttg
gtgaaaaaacaacgctacatcatgaatgaatttgatcatattaatctgataaataacccg
cactacagaatagaggtgcccatcgcttctgaagagtctgacctagatgttcccgataca
gatgagctcagtacacaatcagagctagatgaggcaataataagaccaaagcggacgttt
gatgatgactattctgagtgtagtacagtagattataaaccccctgacccagaaaaggaa
gaagatgctttagaacataaagaagaggatggcccggaacaatgttttactgacgcatgt
ataagaagatttccattcctgaatgttgatatcacaacagaaaagggaaaactatggtgg
aatatacggaaaacctgtttcaagattgttgagcacaactggtttgaaacatttattatc
ttcatgattctgctcagcagtggtgccctggcatttgaagatatttacattgaacaaagg
aaagttataaggactatgttggagtatgctgataaagtgttttcctacgtatttgtaatt
gaaatgttgctaaaatggacagcatatggcttcaaggtgtattttactaatgcttggtgc
tggctggatttccttattgttgatgtgtctttgatcagtttgactgctaactggttgggt
tattcagaacttggcgctatcaaatccctgagaacattgagagccctcagaccattgaga
gcattgtcaagatttgaaggcatgagggtggtggtgaatgcattactgggtgccatccct
tccatcatgaatgtgctgctggtttgtttaatcttctggcttatcttcagcatcatggga
gtcaatctgtttgctgggaaatattacaaatgtattaacagcacaacgtctgaaatgttt
gacacctcggtggtgaacaatcgctccgattgctttgctttaaattacacagaagaagtg
cggtgggtcaatgtcaaagtgaatttcgacaatgtgggtctgggatacctgtccctgctg
caagtggcaaccttcaaaggctggatggacatcatgtatgcagctgtggactctagggat
attgaggatcaaccagagtatgaagtaaacttgtacatgtatttgtactttgtcatattc
atcatttttggtgcattcttcacgctaaacttgtttattggtgtcatcatagacaacttt
aaccagcaaaagaaaaagtttggaggaaaagatatcttcatgacagaagaacagaaaaaa
tactacaacgctatgaaaaaactagggtctaagaagccagtgaaaccgattcctagacca
gagaacccagtccaaggagtcgtctttgattttatctcaaaacaagcctttgacattgtt
attatgattttgatttgcctcaacatggtgacaatgatgattgaaacagatgatcagagt
caacagaaaatagatatactcttcaatatcaaccttgtgttcatcgtcatcttcactgca
gagtgtgtccttaaaatgttcgctctaagatattatttctttactattggatggaatatt
tttgactttgtggtggtcatcctttctatagctggaattgtcctctcagacctcatagcg
gagtactttgtctcccccacacttttcagagtgatcagacttgcacgaatcgggagggtt
cttcgacttattaaaagcgctaagggaattcggacgctgctcttcgccctaatgatgtct
cttccagccctgttcaatattgggctgctcctgttcttagttatgtttatatattcaata
tttgggatgtccaactttgcttatgtgaagaaggaatctggaattgatgatatgtttaat
tttgagacgtttggaaatagtatgatttgcttattcatgattaccacttcagctggatgg
gatgggcttttgaatccaattcttaacagcagccctccagactgtgaccctcatttagag
aaccctggaactgcagtgcatgggaactgtgggaatccatccatgggcattatgttcttt
tgcagctacatcattatttcttttctgattgttgtcaatatgtacattgccattatcttg
gagaacttcaatgtggctacagaagaaagcagtgaacctctctgtgaggatgactttgag
atgttttatgaaacttgggaaaagtttgatcccgatgcaactcagtttgttgaatacagc
cggatgtcagactttgtagataccttacaagagcctttacgaataccaaaaccgaacaga
attaaactaattaccatggacctccccatggtaactggagataagatacactgcctggac
atattatttgcactgactaaagatgtgttgggggactcgggggaaatggatgctttaaaa
gcttcaatggaagaaaaatttatggcggctaatccatccaaagtgtcgtatgagcccatt
actaccactttaaaaagaaaacaggaagaagtcagtgccatcaaaatccagagagcattc
cggaggcatcttctcaaacgctctgtaaaacaggcttcctatgtctaccgccacagccag
gatttggactctacagtcaatgagcttcctgagaaagaaggcctggtagcggagagaata
agcttggcatatgatcaatatgtagaggaaggaggaacaaatggggctcagaaatcaaga
tctacaaacagatactctcgaagcagtggagacgattaa
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integrated database retrieval system
