Pseudophryne corroboree (corroboree frog): 135056283
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Entry
135056283 CDS
T11513
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pcob
Pseudophryne corroboree (corroboree frog)
Pathway
pcob00514
Other types of O-glycan biosynthesis
pcob04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
135056283 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
135056283 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pcob01003
]
135056283 (RFNG)
Enzymes [BR:
pcob01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
135056283 (RFNG)
Glycosyltransferases [BR:
pcob01003
]
Glycan extension
O-Glycan
135056283 (RFNG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
135056283
NCBI-ProteinID:
XP_063817307
LinkDB
All DBs
Position
3:complement(544968123..545008764)
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AA seq
372 aa
AA seq
DB search
MKISCMGLTKIFFLLSVSVCVVVFILLPWGQYGLPRPHPAPACNLTRASSYREPHWGKTR
NLEQRHNQSDHFREWESYSVEAGSLQDHGQRDSLHVKQPLQIEDLFIAVKTTKKYHKSRL
DVLLQTWISQAKEQTFIFTDWEDQELRQKIGNHMVNTNCSAVHTRQALCCKMAVEYDKFV
MSAKKWFCHLDDDNYLNVRNLLDLLSVFPHNADIYVGRPSLDHPVETLDRVKGDGSASLK
FWFATGGAGFCISRGLALKMSPWASMGNFISTAEKVRLPDDCTIGYIIEGMLEVKMQHSN
LFHSHLENLQRLPQNALLQQVTLSYGGPVNRRNVVRVAGSFSLEQDPTRFKSVHCLLYPE
THWCPNGKSTAH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaagatctcctgcatgggactgaccaagatttttttcctgctgtctgtgtcagtctgt
gttgttgtcttcatactccttccttggggccagtatgggttaccaagacctcacccagca
ccagcatgtaacctaacccgtgccagcagctaccgtgagcctcactggggaaaaacccgc
aatcttgagcaacggcacaatcaaagtgaccattttcgagaatgggagagctacagtgtg
gaagcaggatcccttcaagaccatgggcaaagagacagccttcatgtaaagcaacctctt
cagattgaagatttatttattgcagtaaaaaccacaaagaaataccataagagccgcctt
gatgtacttctgcaaacctggatctcccaagcgaaggagcagactttcatattcacggat
tgggaagaccaagaactgcgtcagaaaataggaaatcacatggtgaacaccaactgctct
gcagtacacacccgccaagctctgtgctgtaaaatggctgtggaatatgacaagtttgtc
atgtctgccaaaaagtggttctgtcatttggatgatgacaattatttgaatgtacgcaac
ctactggacctattgtctgtattcccacacaatgcagacatctatgtgggaaggcccagt
ctagatcatcctgtggaaacactggatagagttaaaggagatggttcggcatccttaaag
ttctggtttgcaactggtggtgctggcttctgtatcagccgaggacttgctctgaagatg
agtccatgggctagtatggggaacttcattagcacagcggagaaggttcggctccctgat
gactgcaccatagggtacattattgaaggaatgctggaagtaaaaatgcagcacagtaat
ctcttccattcacacctagaaaacctgcagagactcccgcagaatgctttgctgcagcag
gtaacgctgagttatggtggtcccgtaaacagacgaaatgttgtgcgagttgcagggtct
tttagcctagaacaagatcctactagatttaagtctgttcattgtcttttgtaccctgaa
acacactggtgtccgaatgggaagtctacagcccactga
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