KEGG   Pseudophryne corroboree (corroboree frog): 135056893
Entry
135056893         CDS       T11513                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
pcob  Pseudophryne corroboree (corroboree frog)
Pathway
pcob03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcob00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135056893 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcob03041]
    135056893 (SMNDC1)
Spliceosome [BR:pcob03041]
 Complex A
  U2 snRNP components
   U2 related factors
    135056893 (SMNDC1)
 Complex B
    135056893 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    135056893 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR SH3_AtC3H22 LMBR1
Other DBs
NCBI-GeneID: 135056893
NCBI-ProteinID: XP_063818707
LinkDB
Position
3:786767729..786797093
AA seq 238 aa
MAEELAKQLAGYKAQLQQVETALTANGENEDLLKLKKDLQEVIELTKDLLSSQPSEAPDS
SDDVTSAGGSHSWKVGERCMSVWNDDGQWYEAEIEEIDEENGTAAITFMGYGNAEVISLL
NLKPLEEGRKAKEDSSSLPMSKKEMIAQQREYKKKKALKKAQRIKELEAEREDQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atggctgaagaactggcaaaacagctagctggctacaaagcccaactgcagcaggtggag
acagcgctaacagccaatggagagaatgaggacctgctgaagctgaagaaagatttacag
gaagttatcgaattaactaaagaccttctgtcatcacaaccttccgaagcccccgacagt
tcagatgacgtcacttccgcaggcggcagccattcctggaaagtgggggagcggtgtatg
tccgtttggaatgacgatggacagtggtacgaggctgagatcgaagagatagacgaggag
aacggcacagcggccatcaccttcatgggttatggaaacgccgaagtcatatcgctgctg
aacctgaagccgttggaggagggacggaaagccaaggaggacagcagcagtcttcctatg
tctaagaaagaaatgattgcgcagcagagagagtacaagaagaagaaagccttgaagaaa
gcgcagaggataaaggaactggaggcggagcgagaagaccagaaatctaagtggcagcaa
ttcaataacaaggcgtattctaaaaacaagaagggacaggtgaaaagaagcatctttgcc
tcccccgagagcgtcaccggcaaggtcggagtgggcacgtgtggcattgcggacaaaccg
atgacacagtaccaagacacttccaaatacaacgtgcggcacttgatgccgcagtaa

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