Phasianus colchicus (Ring-necked pheasant): 116228277
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Entry
116228277 CDS
T07365
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc00900
Terpenoid backbone biosynthesis
pcoc01100
Metabolic pathways
Module
pcoc_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
116228277 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pcoc01006
]
116228277 (GGPS1)
Enzymes [BR:
pcoc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
116228277 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
116228277 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
116228277 (GGPS1)
Prenyltransferases [BR:
pcoc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
116228277 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
116228277
NCBI-ProteinID:
XP_031447896
Ensembl:
ENSPCLG00000000540
UniProt:
A0A669P146
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
METETRRRKGSWVMVFFTAARSGWRSDLAPVADYVSQITPRAAAARGRALGRMLIQGGGT
AGACAVRPRWRIFPQERKVAPGGAEEGGALPAERRCCYCRSGAGAARAAVESEQTTFYER
DMDGMDETSKRILEPYQYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNAS
LLVDDIEDNSKLRRGFPVAHSIYGIPSVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLL
ELHKGQGLDIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQLFSNYKKDLKPLLNTL
GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSKPESTQVQNILRQRTEN
IDIKKYCVHYLENVGSFEYTRNTLKELESEAYKQIESLGGNPELVALVEQLSKMFKENDN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgagactcggcgccgaaaaggttcatgggtgatggtgttcttcaccgccgct
cgttccggctggagaagcgatttggcgcctgtcgcggactacgtatcccagatcacaccg
cgcgcggccgccgcgagggggcgggccctgggccgaatgctaattcagggaggaggcacg
gccggcgcctgcgcggtgcggccccggtggcgcattttcccccaagagaggaaggtggcg
cccggcggagcggaagagggcggcgctcttcccgcagagcggcgctgctgctactgccgg
agcggagcgggcgcggctcgggccgccgttgaaagcgagcaaactaccttttatgaaaga
gacatggatgggatggatgaaacatctaaaagaattctagagccataccagtatttactt
caactaccaggtaagcaagtaagaaccaagctgtcacaagccttcaatcactggcttaat
gttccagaagataaaatacaggttatcattgaagtgacagagatgttacacaatgcaagc
ctacttgtggatgatattgaagataactcaaagctacgacggggctttccagtggcacac
agtatctatggaattccatctgtaatcaactgtgctaattatgtttatttccttggctta
gagaaggttttaacccttgatcacccagatgctgttaaagtttttactcgtcagctactg
gaactccataaaggtcaaggcttggacatttactggagggatacttacacctgccctaca
gaagctgaatacaaagctatggtactgcaaaagacaggcggtctctttggattagctgta
ggcctcatgcagctcttctcaaattataagaaagacttaaaaccacttcttaacacactt
ggtctcttcttccaaataagagatgactatgccaacttgcactccaaagaatatagtgaa
aacaagagtttttgtgaagatttaactgagggcaagttctcattcccaactattcatgca
atttggtcaaaacctgaaagtacacaggtgcaaaacattttacgtcaaaggacagaaaac
atagatataaaaaaatactgcgtgcattacctcgaaaacgtgggttcatttgagtacact
cggaatacactgaaagagcttgaatctgaagcctataaacaaatcgaatcacttggggga
aaccctgagcttgtagcactagtggaacagctgagcaaaatgttcaaagaaaatgacaat
taa
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