Phasianus colchicus (Ring-necked pheasant): 116228830
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Entry
116228830 CDS
T07365
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04620
Toll-like receptor signaling pathway
pcoc04621
NOD-like receptor signaling pathway
pcoc04622
RIG-I-like receptor signaling pathway
pcoc05164
Influenza A
pcoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116228830 (TRAF3)
04621 NOD-like receptor signaling pathway
116228830 (TRAF3)
04622 RIG-I-like receptor signaling pathway
116228830 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
116228830 (TRAF3)
05168 Herpes simplex virus 1 infection
116228830 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
Cast
MPS2
ATG16
Sina_ZnF
zf-C3HC4
FliJ
CEP104_ZnF
Spc29
KxDL
GAS
Crescentin
DUF1664
SPATA24
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
116228830
NCBI-ProteinID:
XP_031448820
Ensembl:
ENSPCLG00000005269
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MDTSKKTEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHFILC
NPKQTECGHRFCETCMNALLSTPSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLKTDCQFEELACPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSMLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaagacagaaccccctttatctgtagaaatggtacaacaaagggcc
aatcctgatcgcagtccttcggcatcaatttatgttccagagcaaggtggctacaaagag
aaatttgtaaatgctgtggaggataagtataaatgtgaaaaatgtcacttcatcttatgc
aatcctaaacagactgaatgtggacaccgattctgtgagacttgcatgaatgccttgctg
agcactccgagtccaaaatgtacagcatgtcaagaaagcatagtaaaagacaaggtattt
aaggataattgttgcaggagagaactacttgcccttcagatatactgcagaaatgagaac
aagggctgcaaagaacaactttccttgggtcaattactcatgcatttgaaaactgattgt
cagtttgaagaacttgcgtgtcctcgtgctgattgtaaagaaaaaatactgagaaaagat
ttgccagaccacgtagagaagacctgtaaataccgggagacaacttgtaaatactgtaaa
agccaagtcccaatgattatgttgcagaaacatgaagatacagactgcccgtgtgtcatg
gtttcatgtcctcataaatgcagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctacggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcagaaaaactgaaagaactggacaaagaaatccgtcccttccgg
cagaactgggaggaggctgacagcatgaagagcagtgtagaatccctccagaatagagtg
actgagctggaaagtgttgacaaaactgcagggcaaggagctcgaaatacaagcatgcta
gagacacagctcagcaggcacgatcagatgctgagtgttcatgatattcggctggctgac
atggatctccgattccaagttttagaaactgctagttacaatggagtgttaatttggaag
attcgagattataaacgtcggaagcaagaggcagtcatggggaagactctgtccttgtac
agccaacccttttacactggatactttggctacaagatgtgtgccagagtttaccttaat
ggagatggcatgggcaaggggacgcacttgtcgctgttttttgtcataatgcgtggagaa
tatgatgcattgcttccttggccatttaaacagaaagtgactctcatgctaatggatcag
ggtccgtctcggcgccacttaggagatgctttcaagccagatccaaacagtagcagtttc
aagaagccaactggagaaatgaacattgcgtctggctgcccagtctttgtggctcaaact
gtcctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
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integrated database retrieval system
