Phasianus colchicus (Ring-necked pheasant): 116229116
Help
Entry
116229116 CDS
T07365
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04010
MAPK signaling pathway
pcoc04120
Ubiquitin mediated proteolysis
pcoc04140
Autophagy - animal
pcoc04144
Endocytosis
pcoc04620
Toll-like receptor signaling pathway
pcoc04621
NOD-like receptor signaling pathway
pcoc04622
RIG-I-like receptor signaling pathway
pcoc05132
Salmonella infection
pcoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116229116 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116229116 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116229116 (TRAF6)
04140 Autophagy - animal
116229116 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116229116 (TRAF6)
04621 NOD-like receptor signaling pathway
116229116 (TRAF6)
04622 RIG-I-like receptor signaling pathway
116229116 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116229116 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
116229116 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoc04131
]
116229116 (TRAF6)
04121 Ubiquitin system [BR:
pcoc04121
]
116229116 (TRAF6)
Enzymes [BR:
pcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116229116 (TRAF6)
Membrane trafficking [BR:
pcoc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116229116 (TRAF6)
Ubiquitin system [BR:
pcoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
116229116 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
SlyX
Med21
PspA_IM30
RING_XB3-XBAT31
TRAF3_RING
zf-RING_11
Sina_ZnF
UPF0242
HAP1_N
DUF4455
Spc29
U-box
CENP-F_leu_zip
DUF1664
HMMR_N
PUMA_CC
DUF16
ADIP
Motif
Other DBs
NCBI-GeneID:
116229116
NCBI-ProteinID:
XP_031449209
Ensembl:
ENSPCLG00000005511
UniProt:
A0A669PY53
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MSLLHSDSSCGARDMDGGCCAAMASACSGGAKEDSVSVGSGTSNPPSSFTEETQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLTVKCPNKGCCMKMELRHLEEHQLHCDFTTVECPQCQGAFQKNHLKEHMTQ
ECPRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTMLIRQQMPNHYDNDCPTAPV
PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSIQNISVTATNPVPFINGLPFEPAL
FSHVSHAPYNCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL
EGKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQL
PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL
AFQRPTIHRNPKGFGYVTFMHLQTLKQRTFVKDDTLLVRCEVLTRLDLNSLRREGFQARS
TDGAA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctacacagtgatagcagctgtggggcccgagacatggatggcggctgctgt
gcggccatggccagcgcctgcagcgggggagcaaaagaagacagtgtgagtgtcggcagc
gggaccagcaacccgcccagctccttcacggaggagacgcagggatacgatgtggagttc
gatccgcccttggaaagtaaatacgagtgtccgatctgcttgatggcccttcgggaagca
gtgcagacgccgtgtgggcaccgtttctgcaaaggctgcattgtcaaatcaataagagat
gcgggtcacaaatgtccggtagacaacgaaattctacttgaaaatcaactttttccagac
aacttcgctaaacgggaaatcctttcattaaccgttaagtgtcccaacaagggctgctgt
atgaagatggagctgagacatttagaggagcaccagttgcattgtgatttcaccactgtg
gaatgtccacagtgccaaggagcctttcagaagaaccacctgaaagagcacatgacacag
gagtgtccccggcgtcaagtgtgctgtccaaactgtgccacatctatggcttatgaagat
aaagagcttcatgaccaaacctgccctcttgccaatgtattctgtgaatattgcaacaca
atgctcatcaggcagcagatgcccaaccattatgataatgattgtcctactgccccagta
ccatgcttttacagtgcctttgggtgtcctgaaaagatgcagaggaacgaactggcacga
cacatgcaggaattcactcaggttcacatgagaatgatggctcagagcattcaaaatatc
agtgttactgctacaaaccctgtaccttttatcaatggtctaccgtttgagcctgccctc
ttctcccatgtgtcacatgccccatataattgtaatccagaagttgaaaacttcaaagaa
accattcagcaattggaaggtcgtctggtgcgacaagatcaccaaatcagagaactcatt
gcaaagatggagacacaaaacactcacatggcagaactcaaacgtactatccgaaatttg
gagggaaagattactgaaatggaggcacagcaatgtaatggtatttacatctggaagatc
gagaacttcagtggacttcagaaagcccaggaagaagagagacctgttgtgatgcacagt
cctggcttctatactggaaaacctggctacaagctgtgtttgcgcctgcatatccagtta
ccaaatgctcagcggtgtgctaattttatatctctgtttgtccacacgatgcaaggagaa
tatgacagccatctgccttggcctttccagggcactatacgactttctattttagatcaa
tcagaaggccctgagagacagaatcatgaagaagtaatggaagccaagccagagttactc
gccttccagagaccaacgattcatcgcaatccaaaaggttttggttatgtgactttcatg
cacctgcaaactttgaagcaaagaacctttgtaaaggatgatacccttctggtgcgctgt
gaagttctaacacgtctagacttaaacagccttcgcagggaaggatttcaagctcgcagt
actgatggagctgcgtaa
DBGET
integrated database retrieval system
