Phasianus colchicus (Ring-necked pheasant): 116229306
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Entry
116229306 CDS
T07365
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04115
p53 signaling pathway
pcoc04145
Phagosome
pcoc04148
Efferocytosis
pcoc04350
TGF-beta signaling pathway
pcoc04510
Focal adhesion
pcoc04512
ECM-receptor interaction
pcoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116229306 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116229306 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116229306 (THBS1)
04148 Efferocytosis
116229306 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
116229306 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
116229306 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116229306 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoc04131
]
116229306 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcoc00536
]
116229306 (THBS1)
Membrane trafficking [BR:
pcoc04131
]
Endocytosis
Phagocytosis
Opsonins
116229306 (THBS1)
Glycosaminoglycan binding proteins [BR:
pcoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116229306 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
VWC2L_2nd
EGF_3
cEGF
TSP1_ADAMTS
Laminin_G_3
TSP1_CCN
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
116229306
NCBI-ProteinID:
XP_031449573
Ensembl:
ENSPCLG00000007848
UniProt:
A0A669PLB0
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MLAMGPAAVLVLLLLALGGPEAKRTAESRGDDDSVFDVFELTGLMRKGAGRRGPGVHLMK
GPETSSPAYRIEDASRIPAVPDSKFQDLLDIIHAEKGFILLATLRQAKKSRGTLLAVERK
DGSGHVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVG
CEKMENAELDIPIQNIFTRDLASIARLRIAKGGVNDNFQGLLQNVRFVFRTTLETILRNK
GCSSSTSPIITLDNPMNGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMV
TTLQDRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRK
VSCPLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLN
NRCEGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGMGMITRIRLCNSPVPQLN
GKPCEGEARETKPCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKT
CVGEAKGTQVCNKQDCPVDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGIHCQDID
ECKEVPDACFVFNGVHRCENTEPGYNCLPCPPRFTGSQPFGRSVEDAMANKQVCKPRNPC
TDGTHDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANAT
YHCKKDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPFIYNPQQYDYDRDDV
GDRCDNCPYNHNPDQIDTDNNGEGDACAVDIDGDGVLNERDNCQYVYNVDQRDTDLDGVG
DQCDNCPLEHNPDQEDTDSDRIGDECDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGK
GDACDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENV
EISETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSG
TFFINTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTT
GPGEHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKK
IMADSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccatggggccagccgctgttctcgttctccttctcctggcgctcggcggcccg
gaagccaaacgcacggcagagtccaggggtgatgatgacagtgtctttgatgtctttgaa
ctcactggcttgatgcgcaagggagctgggcgccggggacctggggtgcacctgatgaag
gggccagagacctccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtc
cctgattccaagttccaagacttgttagatatcatccatgctgagaagggcttcatcctt
ctggccactctccggcaagccaagaagagcagaggcacactgctggctgtggaacggaaa
gatggctctggtcatgtcttcagtctcgtttcaaatggcaaggcaggcaccttggacctg
agcctctctggtgatggcaagcagcagttagtgtccgtagaggatgctttgttagctaca
ggacactggaagaacatcaccttgtttgtgcaagaagaccgggctcagctttatgtgggg
tgtgagaaaatggagaatgctgaactggacattcccattcaaaacattttcaccagggac
ctggccagcattgccaggctccgtattgccaaagggggagtcaatgacaacttccaggga
ctgttgcagaatgtacggttcgtctttagaacaactctggaaactattctgaggaacaaa
ggctgctccagctctactagtccaatcattactttggacaaccccatgaatggttccagc
ccagctatccgcaccaattacattggccataaaacaaaggacattcaagcagtttgtggc
ttttcctgtgatgaactaactaacatgtttgtggaactgcaaggcttacggtccatggtt
acaacacttcaagacagagttcgcaaagtgactgaagaaaatgaactgattgccaaagtg
gtccagatcactcctggggtatgcattcataatgggatcttgcacaaaaataaggaagag
tggactattgacagctgcactgaatgtacttgccagaactctgccactatatgccggaaa
gtgtcttgtcctctcatgccttgttccaatgccactgtgcctgatggggagtgctgcccc
cgatgctggcctagcgactatgcagatgatggatggtctccttggtctgaatggacttcg
tgttcagtgacctgtgggaatggaattcagcagagagggcgttcctgtgacagtctcaac
aaccgctgtgaagggtcttctgtgcagactcggacttgccatcttcaagagtgcgataag
agatttaaacaagatggtggttggagccactggtcaccgtggtcatcatgttcagtcacc
tgtggtatgggcatgatcactagaattcgtctctgcaactctccagtaccacagctgaac
ggcaagccttgtgagggtgaagcaagagaaaccaagccctgccagaaagatccttgtcca
attaatggcaactggggaccatggtctccatgggatgcttgcacagtgacatgtggagga
ggacttcagaaacgcagccgtctctgcaataatcctgagcctcagtatggtgggaagact
tgtgtaggtgaagctaaaggaactcaggtctgcaacaaacaggactgtccagttgatggg
tgtctgtctaatccctgctttgcgggaactacatgtacaagctcccctgatggttcttgg
aagtgtggtgcctgtccagctggctaccatggcgatggtatccactgccaagatattgat
gagtgcaaagaagttcctgatgcttgctttgtcttcaatggagtacacaggtgtgagaat
actgaacctggatacaactgtctgccttgtccaccacgtttcactgggtcacagccattt
ggtcgcagtgttgaggatgccatggcaaacaaacaggtctgcaagccacgtaatccatgc
acagatggaacacatgattgcaacaagaatgccaaatgcaattaccttggccacttcagt
gacccaatgtatcgttgtgaatgtaaaccaggctatgctggcaatggcataatctgtgga
gaagataccgacttggatggatggccaaatgagaaccttgtctgtgttgccaatgccact
taccactgtaaaaaagataactgccccaatctccccaactctgggcaggaagactatgat
aaagatgggattggtgatgcctgtgataatgatgatgacgatgatggtattcctgatgac
cgggacaactgcccattcatctacaacccacagcagtatgactatgacagggatgatgtt
ggtgaccgttgtgataactgcccctacaatcacaaccctgatcagattgacactgacaac
aacggagaaggagatgcatgtgcagtggatattgatggagatggggtcctcaatgaaagg
gacaactgccaatatgtctacaatgtagaccagagggacacagacttggacggtgttgga
gatcagtgtgataactgtccactggaacacaatcctgaccaggaagatactgactctgac
cgtataggtgatgaatgtgacaacaaccaggacatagatgaagatggtcatcaaaataat
cttgataactgcccttatgtgcccaatgccaatcaagctgatcatgacaaggatggaaaa
ggtgatgcctgtgaccatgatgatgacaatgatggtattcctgatgacaaagataactgc
agattagttgccaacccggatcaagcggattctgatggtgatggacgtggagatgcttgc
aaagatgactttgaccaagacagtgtgccagacattgatgacatctgtcctgaaaacgtg
gaaatcagtgagactgacttccgaaggtttcagatgattcccttggatccaaaaggaaca
tctcaaaatgatccaaactgggttgtacgtcaccagggtaaagaactggttcagacagtc
aactgtgaccctggccttgcagttggttttgatgaattcaatgctgtggacttcagtggc
accttctttatcaacacagaaagggatgatgattatgctggctttgtatttggctaccaa
tctagcagtcgtttctatgttgtcatgtggaagcagattactcagtcttactgggactcc
acaccaaccaaagctcaaggctactcaggtctctccatcaaggttgtgaattccaccaca
ggtccaggagaacaccttcgtaatgctctgtggcacacaggaaacacacctggccaggtg
agaactttgtggcatgaccctcgtcacataggctggaaagacttcactgcatacagatgg
cgccttagccatagaccaaagactggctacatcagagttgtaatgtatgaagggaagaaa
atcatggcagactcaggaccaatctatgataaaacttatgctggtggtcgtctaggatta
tttgtcttctctcaagaaatggtgttcttctcagatcttaaatatgaatgcagagatcca
taa
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