Phasianus colchicus (Ring-necked pheasant): 116233475
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Entry
116233475 CDS
T07365
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04115
p53 signaling pathway
pcoc04210
Apoptosis
pcoc05164
Influenza A
pcoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116233475 (APAF1)
04115 p53 signaling pathway
116233475 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
116233475 (APAF1)
05168 Herpes simplex virus 1 infection
116233475 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
NB-ARC
WD40_CDC20-Fz
APAF1_C
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
APAF-1-like_WHD
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
CARD
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WD40_RFWD3
Ge1_WD40
CARD_2
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_Vps41
eIF2A
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_DCAF12
WD40_like
Beta-prop_Nup120_160
Beta-prop_WDR11_2nd
AAA_16
AAA_22
Dark_WHD
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
116233475
NCBI-ProteinID:
XP_031456261
Ensembl:
ENSPCLG00000009163
UniProt:
A0A669PS96
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MDAKSRTCLIRHRQALEKDIKTSYIMDCMVSDQVLTLQEEEKVKQQNTQKERAAMLIDTL
LKKDNNAYRSFYNALLHEGYRDLAALLQDGIPVFSSGNGKNTMDEMTSYVKTTLCEGGVP
QRPVVFVTRPKLVDAIKQKLCSLGNDPGWVTVYGMAGCGKTVLTAEALRDHQLLEGYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVSGNKYEIHVESGLTHEKGLEVLALFVN
MKISELPEQANCIITECKGSPLVISLIGALLRDFPNRWEYYLKQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLSNDLKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGNSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKRYYKLHVPVLSQEDC
MYWYNFLAYHMAGANMQKELRDLMFSLDWIKAKTELVGPAHLIHEYVEYSSVLDQKDSII
RENFQEFLSLNGHLLGRQPFPDITQLGLCQPETSEVYQQAKLRAQRETGTFYLEWINKKS
LKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILC
CTFSADDKYVATCSADKKVKIWNSRTGRCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDD
TFIKLWNLKDRYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWDVHSANELKTIE
IKEFFRNADEQQDDVEVLVKCCSWSRSSDAILVVAKNKLLLFDVTTCNLLTQVIISHHST
IQYCDFCAGDELVAVALSHCSVELWNIKSLSKVADCRGHMSWVHCVTFSSDGSLFLTSSE
DQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKHIQLINGNTDSIIIQTEP
QESLICCCCLSEDLKFAAFGQENGAIKVLQLLDGKVLTSREAYRTSVQHCRFTTDCQTLI
SSAHDAVIQVWNWQLNECVFLRGHKEAIKDFAFLENSKLLSWSFDGTVKVWNITTGITEK
DFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSN
KLLATGDDKGDIRIWDILTGELLHFCSSVTVDEGEPTHGGWVTDLSFSPDSKMLVSSGGY
LKWWDVTTGESLQTFYTNGTNLKSIHVSPNFEVYVTVDNLGILYVLQKL
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgaagagtagaacgtgtttaattaggcatcgtcaggcactggagaaagacatc
aaaacctcttacatcatggattgtatggtttctgaccaagtgctgacattgcaggaggag
gagaaagtgaaacaacagaatacgcagaaggagcgagcagctatgctaatagatactctt
cttaagaaagacaataatgcatatagatctttttataatgcactgcttcatgaagggtac
cgagatcttgctgcacttcttcaggatggcatccctgtcttctcctctgggaatggaaag
aacactatggatgagatgacttcatatgtcaaaacaactctctgcgaaggaggtgtacca
cagagaccagttgtgtttgtcactcggccaaagctggtagatgctattaaacagaaactg
tgcagcttaggaaatgatccaggttgggtgacagtttatggaatggcaggctgtggaaag
accgttttaacagcagaagctttaagggatcaccagctcttggaaggttattttccagga
ggagttcactggatctctgtgggaaaacaggacaaagcagggctccttataaagctacag
aatctttgtagtagattagagcatgactctactctttcacagagaccaccacttaacatc
gaggaggccaaagaccgtcttcgtttgctgatgctgcgcaaatacccaaggtctcttttg
gtcctggatgatatttgggattcctgggtgttaaaagcatttgataatcaatgtcaggtt
cttatcaccagcagggacaggagtgtgacagatgctgtgtctggcaataaatatgagatt
catgtggaaagtggactaacacatgagaaaggactggaagttttagccctgtttgtgaat
atgaaaatatcagaactaccagaacaagctaactgcattataacagaatgcaaaggttct
cctcttgtgatatccttgataggtgcattactacgagatttccctaatcgctgggaatac
tatctgaaacagttgcagaataagcagtttaaaagaataagaaaatcttcatcttatgac
tatgaagcccttgatgaagcaatgtccataagtgtagagcaactgagtaatgatttaaaa
gattactataaagacctctccatcctcccaaaagatgttaaagtacctactaaggtgctc
tgtattctttgggatatggaaactgaagaagttgaagatatattgcaggaatttgttaac
aaatcattattgttctgtgatcgtaatgggaattcatttcattattatttgcatgatctt
caacttgactttcttacagagaagaatcgcaaccagcttcaggaactacataaaaacata
gtaaatcagtacaagagatattacaagcttcatgtacctgtgctatctcaagaggactgc
atgtactggtataactttctagcgtatcacatggctggtgccaacatgcagaaggaactc
cgtgatcttatgttttctctagattggattaaagctaaaacagaattggtagggcctgct
catctaattcatgaatatgtagagtatagttcagtcctggatcaaaaggatagcatcata
cgtgagaattttcaggaatttctgtctttaaatgggcaccttcttggacgacagcctttt
cctgacatcacccagctgggtctttgccaaccagagacatcagaggtgtatcaacaagcc
aagctgcgggctcaaagagaaacaggaacattttacttggaatggataaataaaaaatcc
ttgaaaaacctttcccgtctggttgttcgtccgcatagagatgcagtttaccatgcctgc
ttttctagggatagacaaagaatagcatcatgcggagctgataaaacacttcaggtgttt
aaagcagaaagtggagagagattgctggagataagtgctcatgatgatgaaatactttgc
tgcactttttctgcggatgataaatatgtagctacttgttcagctgataaaaaagtgaag
atctggaattcaagaacaggcaggtgtttgtacgtatatgaagaacacacagagcaggtc
aattgctgccagttcaataacagaaggggtcagtatcttttagccacctgctcagatgac
actttcatcaaactttggaatttgaaggataggtattgtaggaatacgatgtttggtcat
gtaaacgctgtcagtcactgtagattttcaccaaatgatgactatattgctagctgctca
acagatggaacagtgaagctttgggatgtgcattcagcaaatgaactgaaaactattgag
ataaaagaattcttcaggaatgcagatgagcagcaagatgatgtggaggttttagtaaaa
tgttgctcttggtccagaagtagtgatgcaattttggtggtagccaaaaataagcttttg
ctttttgatgttacaacatgtaatctgttaacacaagtcatcataagtcatcacagtaca
atccaatattgtgatttctgtgctggggatgagttagtagcagttgctttgtctcattgt
tctgttgagttatggaatattaaatccttatcaaaagtagcagattgcagaggacatatg
agctgggttcactgtgtgacattttcctcagatggatctttatttctgacatcttctgag
gaccagacaataaggatttgggaaacaaacaaggtgtgcaagtcttctgatgctgtgcta
aaaagtgaactggatgttgtatttcacaatggtgaagtcatgattttagcaatttacaat
cagaagcatattcaactcattaatggaaatacagacagcattatcatacagacagaacct
caggaatcccttatttgctgctgttgcttaagtgaagatcttaaatttgcagcatttggg
caggagaatggagcaataaaggtactgcagttgttggatgggaaagttctgacgtcccgg
gaggcctacaggacatctgtgcagcattgtcgatttaccactgattgtcagactctgatt
tcgagtgctcatgatgcagtcatacaggtctggaattggcagttgaacgagtgtgtgttt
ctaagagggcataaggaagcaatcaaagactttgcatttctggaaaattcaaaacttctt
tcctggtcatttgatggaacagttaaggtttggaatatcaccactggaataacagaaaaa
gattttgcttgccatagaggtgctgttctttcttgtgctgtctcacctgatggtagtagg
ttttcatctacttctgctgacaaaactgcaaagatatggagctttgaaagttcatctgtt
cttcatgagttgaaaggtcatgaagcctgtgtgcggtgctctgctttctctcctagtaac
aaattactggccactggagatgacaaaggagatataaggatttgggacattttaacaggt
gaattacttcacttctgctcctcagttactgtggatgaaggagaaccaacacatggtggt
tgggtaacagacctctcattttctcctgacagtaaaatgcttgtgtcatctggaggctat
cttaagtggtgggatgtgactactggagaatccttgcaaaccttctacacgaatggaaca
aacctcaagtcaatacacgtgtcccctaattttgaagtgtacgtgactgttgataatctt
ggtattctttatgtattacagaagttgtga
DBGET
integrated database retrieval system
