Phasianus colchicus (Ring-necked pheasant): 116233816
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Entry
116233816 CDS
T07365
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04514
Cell adhesion molecules
pcoc04520
Adherens junction
pcoc04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116233816 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116233816 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
116233816 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcoc01009
]
116233816 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcoc04515
]
116233816 (PTPRF)
Enzymes [BR:
pcoc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
116233816 (PTPRF)
Protein phosphatases and associated proteins [BR:
pcoc01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
116233816 (PTPRF)
Cell adhesion molecules [BR:
pcoc04515
]
Immunoglobulin superfamily
Type II RPTP family
116233816 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Interfer-bind
fn3_2
PTP-SAK
Tc-R-P
DSPc
V-set
Y_phosphatase3
C2-set_2
PTPlike_phytase
Fn3_VIN3
PTP-NADK
Ig_5
Fn3_PTPRU
Insulin_TMD
ICAM_N
TMEM154
DUF3377
Motif
Other DBs
NCBI-GeneID:
116233816
NCBI-ProteinID:
XP_031456801
Ensembl:
ENSPCLG00000003944
LinkDB
All DBs
Position
Unknown
AA seq
1895 aa
AA seq
DB search
MVPNFCVSVLTVLAVILCCLMLPDPAKAGAESKPTFMKAPEDQIGISGGVASFVCQATGE
PKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTS
AKLTVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTAT
SNGRIKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPS
NHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIMQSANYTCV
AISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKPKSL
EGQFQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSPPLK
VQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDSHLPLSMWQKHNTDDSHLTTVGSLI
TGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPASQER
ITKYELLYWEGEDGVQQKVEFDPTSSYAVEGLKPDTLYKFRLGAHSELGVGVYTPTVEAR
TAQSTPSAPPQEVECVSTSSTTIRVSWVPPPVQSRNGVITQYSIAYQAVEGDDSTKHVVD
GIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEVESV
NSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQETVIGGLLP
ETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTALIQWHPPKEMVGE
LLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNRAGPGEEFEKEIT
TAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTVVYRDINSQQDLVNITK
DTSITLMNLKPDTTYDIKVRARTNKGVGPLSPSIQSRTMPVEQVFAKNFRVNAVMKTSVL
LSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVLMNRGNSAGGLQH
LVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQATVPVRWYYIVVVPAEQSPSSPTAR
WRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFTLGDEKNYKGFYN
KPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMELASAKQQDEPEMLWVMGPVLAVI
LIIIIVIAILLFKRKRAHSPSSKDEHSIGLKDSLLAHSSDPVEMRRLNYQTPGMRDHPPI
PVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRV
ILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTATIVMMTRL
EEKSRVKCDQYWPSRGTETYGMIQVTLLDTVELATYTVRTFALYKNGSSEKRELRQFQFM
AWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEK
TVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARNLFAHIQKLTQVPP
GESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGS
DYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQY
WPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTG
EGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVK
TLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5688 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcgtctcagtactcactgtgctagcagtcatcctgtgctgcttg
atgctgcctgatcctgctaaagcaggagccgaaagcaaaccaacatttatgaaagctcct
gaagatcagattgggatttctggaggagtggcctcttttgtgtgtcaggcaacaggagag
cccaagcctcgaatcacatggatgaagaaagggaagaaagtcagttctcagcggtttgag
gttatcgagtttgatgatgggtcgggatctgttctgcggatacagccgctgcgtgttcat
cgagatgaagctatctacgagtgcacagccaccaacagtgttggggagataaacacaagt
gccaaattaacagtgttagaagaagaccacctcccagctggcttcccaaccattgatatg
ggcccacagctgaaggtggtggagaaggcccgcacagccaccatgctctgtgctgccagt
ggtaaccctgatcctgaaatctcctggttcaaggacttcctgcctgttgacactgcaact
agcaatgggagaatcaagcagctccgctcgggagctctgcaaatagagaacagcgaggag
tcggaccaaggcaaatatgaatgtgttgcaaccaacagcgcaggaacccgttattctgcc
ccagcgaacctgtatgtccgagtgcggcgtgttgctcctcgattctcaatccctccgagc
aaccatgaggtgatgcctggagggagcgtgaacctcacgtgcgtggcagtaggtgccccg
atgccctacgtgaagtggatggctggtgtggaggagctgaccaaagaggatgagatgccc
gtcggcaggaacgtgctggagctgaacaacatcatgcagtccgccaactacacctgtgtg
gccatctcttccctcggcatgatcgaagcaacggcccagatcactgtcaaagcgctgcca
aaacctccaacagagccattagtgactgaaacgacagctaccagcgtgaccctcacctgg
gattcgggcaactccgaccccatttcatattacgtcatccagtacaagcccaaatccttg
gagggtcagttccaggaggtggacggtgtggcaacaacccgctatagcataggtgggctc
agccccttctcggagtacgagttccgggtcattgcagttaataacattggcaggggtccc
cccagcgagctggtcgaggctcggacaggagagcaagcaccttcaagtccacccctcaaa
gtccaggcgcggatgctgagtgccagcaccatgctggtccagtgggagcagccagaggag
ccaaacggacagatccgagggtaccgcgtttactacaccaccgactcgcatctgcctttg
agcatgtggcaaaagcacaacaccgatgacagccatctcaccaccgtggggagcctcatc
acagggaccacatacagcatccgtgtcctggccttcacttccgtgggcgacgggccaccc
tcagatatcatccaggtcaaaacgcagcaaggggttcctgcccagccagctgacttccag
gcagaggctgagtctgatacccgcatcctgctgacgtggctgcccgcctctcaggaacgc
attaccaaatatgagctgctgtactgggaaggagaggatggtgttcagcaaaaggtggag
tttgacccaacctcttcatatgctgtggaaggtctcaaaccagacacattgtacaagttc
cggctgggtgcccactctgagctgggtgtaggagtctacaccccaactgtggaagccaga
actgcccaatccaccccttctgccccaccccaagaagtcgagtgtgtaagcaccagctcc
actaccatccgggtaagttgggtgccaccgcctgtccagagccgcaatggggtcatcacc
cagtactccattgcataccaggcagtggaaggagatgacagcaccaagcatgtggtggat
ggcattggacgggagcactccagctgggagatcaaggacctggagaaatggaccgagtac
aaggtgtgggtaagggctcacaccgatgtggggccaggaccggagagcatccctgtgcac
gtgcgcactgatgaggatgtgcccagtgccccaccacgaaaggtggaggtggagtctgtg
aattcaacagccatccgggtgagctggaagctgcccatctccaacaagcagcatgggcag
atccggggctaccaggtgacctacgtgaagctggaaaacaacgagcctcgtgggcagccc
gtcatcaaggatgtcatgctgtcggaagcacaggagacggtcattggaggcctgctgccg
gaaaccacctactccgtcacggtcgctgcctacacaaccaagggagatggtgcccgcagc
aagcccaaggtcatcaccaccacaggggcagtcccggggaagcccaccatgatgattagc
acgacagccatgaacacagccctcatccagtggcacccacccaaggagatggtaggggag
ctgctgggttatcggctgcagtacagacgtcttgatgaggaaaagatgaacacgatagac
ttcgggaagagagaccatcactacactgtgaccaacctgcacaagggggccacgtacctt
ttcaaactgtctgccaagaacagagctggtccaggagaggagtttgagaaggagatcact
accgcagaagatgtgccgagtggcttcccacagaacctgcgcgtggtgggtctcaccact
tccaccacagaggttgcatgggaccccccagtcttggctgaaagaaacggcaagattgtc
aactacacagtggtatacagagacataaatagccagcaggacctggttaacatcaccaag
gacacaagtatcactttgatgaatttgaagcctgataccacttacgacatcaaagtgagg
gcccgcaccaataagggggttgggccgctcagccccagcatccagtctcggaccatgcct
gttgagcaagtgtttgctaagaacttccgtgtcaacgccgtcatgaaaacatccgtgttg
ctgagctgggaagtgcctgactcctataaatctgcagtgccttttaagattctgtacaat
agccagagtgtggaggtggatggccactccatgaagaagctcataagtgacctccagccg
gacacggactattcttttgtgctcatgaaccgtgggaacagtgctggggggctccagcat
ctcgtctccatccgcaccgcacctgacgtcttgcaaagcaaacccatcgccaccaacaag
tacatccaggaaggaaagttcacgcttacccttcccaaagtgcaggccactgtgccagtt
cggtggtactacatcgtggtcgtgccagcagagcagagccccagcagcccaacggcgcgg
tggcggacgcctgatgagatggagctggaccagttgctggaggccataagccagggcagt
cagagcaggcgccagcgacgccaagcagacagactcaagccctacattgctgcccaagtg
gacgtgctgcctgagaccttcaccctgggggacgagaagaactacaagggtttctacaac
aagcccctctctcaggacctgagctaccgctgcttcgtgctggcctcgctggaggatggg
gacacgaagagatacgcagccagcccctactctgatgagattgtgatggaattggcttca
gcaaagcagcaggacgagccggagatgctgtgggtgatgggacctgtcctggctgtgata
ttaatcatcatcatcgtcatcgctatactcctcttcaaaaggaaaagagcacactccccc
tcctcaaaagatgagcactccattggcctgaaggactcgctcttggcccactcttctgac
ccagtcgagatgaggcggctcaactaccagactccaggcatgcgtgaccacccgcccatc
cctgtgactgacctcgccgacaacattgaccggctgaaggccaacgatggcctcaagttc
tcccaagagtacgagtccatagatcctgggcagcagttcacctgggagaactccaacctg
gaagtgaacaaaccgaaaaaccgctatgcaaacgtaatcgcctacgatcactcccgtgtc
atcctgacctccatcgatggggtcccaggcagtgattacatcaatgccaattacatcgat
ggctatcggaagcagaacgcctacatcgcaacgcagggacctctgcctgaaaccctcagt
gacttctggagaatggtgtgggagcagagaacagcaacaatcgtcatgatgaccaggctg
gaggagaagtccagggtgaagtgtgaccagtactggccaagccggggtacggaaacctac
gggatgatccaggtcacactgctggacactgttgagctggcaacctacacagtccgaacc
tttgccctgtacaagaatggctccagcgagaagcgagagctgcggcagttccagttcatg
gcgtggcctgatcacggggtcccagagtatcccaccccgatcctcgctttcctgcggcgg
gtcaaggcctgcaacccacctgatgctgggcctatggttgtccactgcagcgctggcgtg
ggccgaactggttgcttcattgtcattgatgccatgctggagaggatgaagcatgagaag
accgtggacatctacgggcacgtgacgtgcatgcgctcacagcgcaactacatggtgcag
acagaggaccagtacatcttcatccatgaggccctgctggaggcagccacgtgcggcaat
accgaggtgcctgcacgcaacctcttcgctcacatccagaaactgacccaggtgcctcca
ggagagagtgtcactgcgatggagctggaattcaagctgctggccaactctaaagcacat
acctcacgtttcatcagtgccaacctcccatgcaacaaattcaagaaccgcctcgtgaac
atcatgccatacgagctgacgagagtctgcctgcagcccatccggggtgtcgagggctct
gattacatcaatgccagcttcatcgatgggtacaggcagcaaaaggcctacattgccaca
cagggaccactggctgagaccacagaggatttctggcgaatgctatgggagcacaactcc
accatcgtggtgatgttgacaaagctgcgtgagatgggccgggagaagtgccatcagtac
tggcccgcagagcgctctgcccgttaccagtacttcgtggttgaccccatggcagagtac
aacatgccacagtacatcctccgggagttcaaagtcacagatgccagggacggccagtca
cggaccatccgccagttccagttcacagactggcctgagcagggagtgccaaagacagga
gagggcttcatcgacttcatcgggcaggtgcacaagaccaaggagcagttcgggcaggac
gggcccatcacggtgcactgcagcgctggggtcgggcgcacaggcgtgttcatcacactg
agcatcgtgctggagaggatgcgctacgagggggtggtggacatgttccagacggtgaag
actttgcggacacagcggccggccatggtgcagacagaggaccagtaccagctgtgctac
agagcggcactggagtatctcggcagctttgaccactatgcaacgtaa
DBGET
integrated database retrieval system
