Phasianus colchicus (Ring-necked pheasant): 116233866
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Entry
116233866 CDS
T07365
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116233866 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoc03041
]
116233866 (EFTUD2)
Spliceosome [BR:
pcoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
116233866 (EFTUD2)
Complex C
U5 SnRNP specific factors
116233866 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
116233866
NCBI-ProteinID:
XP_031456890
Ensembl:
ENSPCLG00000010857
UniProt:
A0A669Q0B9
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDEDDELGRESKELDELEDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgatgagtttgggaactacatcgggccggagctggactctgac
gatgaggacgatgaactgggccgggagtccaaggagctggacgagctcgaagatgatgat
gatgacgatgatatgggggaccacgacgaggaccaccctgggatggaggtggtgctgcac
gaggacaagaagtactaccccactgctgaggaggtctatgggcccgaagtggagaccata
gtgcaggaggaggacacgcagcctctcactgagcctattattaaacccgtgaaaaccaaa
aagttctctttgatggaacagacgttaccggtcaccgtctatgagatggatttcctggca
gatctgatggacaactctgagctgattcggaatgtgactctgtgtgggcaccttcaccac
ggcaagacttgttttgttgactgcctgatagagcagacgcacccagaaatcaggaagcgc
tacgaccaagatctttgctatactgatatattgttcacagagcaggagaggggagtgggg
atcaagagcacaccagtgaccattgttctgccagacaccaaaggaaagtcttttctcttc
aacatcattgacaccccaggtcacgtcaatttttctgatgaggtgacagctggccttcgt
atttcggatggcgtcgtgctgttcatcgatgcagccgagggggtgatgctgaacacagag
aggctgatcaagcacgcggtgcaggagcggctggcagtgactgtgtgcatcaacaagatc
gaccgcctgatcctggagctgaagttgccccctacagatgcttactacaaactccgacat
attgtggatgaagttaatggtctgatcagcatgtattccaccgacgagaacctcgtcctg
tctccccttctggggaacgtgtgtttctccagctcacagtacagcatctgcttcacgctg
ggatcttttgcaaagatttatgcagacacatatggagatatcaattatcaggagtttgcc
aagcggctttggggcgacatttacttcaacccaaaaacgcggaagttcactaaaaaggcc
ccaaccagcagctcccagcgcagctttgtggagttcattcttgagcccctgtacaagatc
ttggctcaggtggtgggggatgtggacacgaccctgcctcggactctggatgaacttggt
atccacctcaccaaagaggaattgaaattaaacattcgaccgctcctacgacttgtctgc
aagaagttcttcggggagtttacaggctttgtggacatgtgtgtgcagcatattccctcc
ccaaaggtgggagccaagacgaaaatcgaacacacctacaccggtggtgttgattctgat
ctcggggaggccatgagtgaatgtgaccccgacggtccgctgatgtgtcacacaacaaaa
atgtacagcacagatgatggtgttcagttccatgcctttgggagagtgctcagtggtacc
atccatgctgggcagcctgtgaaggtcctgggagagaactacaccttggaggatgaggag
gattcccagatctgcaccgttggacgcctctggatctcagttgcaaggtatcacattgag
gttaaccgtgttcctgctggcaactgggtgctgatagaaggagtggaccagcccattgtg
aagactgcaactgtcacggagccgagaggcaatgaggaggctcagatcttccgacctttg
aagttcaacacaacatctgtcatcaaaatagcagtagagccagtcaacccctctgagctc
cccaaaatgttggatggtctccgcaaagtcaacaagagctacccatcgcttactacaaag
gtggaagagtctggagaacacgtgatcttgggaacaggggagctctacctggattgtgtg
atgcatgatctgcggaagatgtattctgagattgatatcaaggtcgccgatccggttgtg
acattctgtgagacagtggtggaaacgtcctccctgaagtgctttgctgagactcccaat
aagaagaacaagatcacgatgattgctgagcctctggagaagggactcgcggaggatatt
gaaaatgaagtggtccaaataacgtggaacagaaagaagctgggtgaattcttccagacc
aaatatgactgggatttgctggctgcccgttccatctgggcctttgggccggatgccact
ggcccaaatatcctggtagatgatactctgccctcagaggtggacaaggcactgctgggc
tctgtgaaggacagcattgtgcagggatttcagtgggggaccagggaagggcctctctgt
gatgaattgatccgcaatgtgaagtttaagatcctggatgcagtgattgctcaggaacct
ttgcaccgaggtggaggacagatcatcccaacggcacggagggtggtgtactcagctttc
ctgatggccactcctcgtctgatggagccctactactttgtggaggtgcaggccccagct
gactgcgtgtccgccgtgtacaccgtgctggcacggcgcagaggccatgtgacgcaagat
gctccaatcccaggctcccctctgtacaccatcaaagccttcatccctgccattgattcc
tttggttttgagacagacctgaggacccacacgcaggggcaggcattctcactgtctgtc
ttccaccactggcagattgtgcctggtgaccctttggacaaaagcattgtcatccgcccc
ctggagcctcagccagccccacatctggccagagagttcatgatcaagacccggcgcagg
aagggcttgagcgaggacgtaagcatcagcaagttcttcgacgaccccatgttgctggag
ctggccaagcaagacgtcgttctcaactaccccatgtga
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