Phasianus colchicus (Ring-necked pheasant): 116235625
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Entry
116235625 CDS
T07365
Symbol
OTOF
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoc04131
]
116235625 (OTOF)
Membrane trafficking [BR:
pcoc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116235625 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Med19
Motif
Other DBs
NCBI-GeneID:
116235625
NCBI-ProteinID:
XP_031459738
Ensembl:
ENSPCLG00000011738
LinkDB
All DBs
Position
Unknown
AA seq
2015 aa
AA seq
DB search
MALQLQLRTVSGLRGRADRIAKAAFRGLSFYTRVLENCEDEARFDETFRWPVASNIDGNE
ILEIQVFNYSKVFTNRLIGTFRMVLQKVVEEGHVEVMDTLIDDNNSAIQTSISIEIRYQA
LDGTVGTWNDKEFLETPSVHSEGDGRYPLETDSLLSGHRQGTDGSVGKSNQQSAERSFRR
AGKGVFSAMKLGKARPTKDDHRKQDEPAVLEAEDLDRKVMRLGGGLDPDTISLASVTAVT
TNVSNKRSKPDIKMEPSAGRPMDYQVSITVIEARQLVGLNMDPVVCVEVGEEKKYTSMKE
STNCPYYNEYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGSFKMDVGTVYTQPEH
QFYHKWAILSDPEDLTAGLKGYLKCDIAVVGKGDNIKTPHKANETEEDDIEGNLLLPDGV
PPERQWARFYIKIYRAEGLPRMNTSIMANVKKALIGENKDLVDPYVQVAFAGQKGKTSVQ
KSSYEPLWNEQIIFTEMFPPLCKRIKIQIRDSDKVNDVAIGTHFIDLRKISNEGDKGYLP
TFGPAWVNMYGSTRNYTLMDEHQELNEGLGEGVSFRARLLMSLAVEILDTTNPEINSSTE
VQVEQATPVADNCTGKMEEFFLFGAFLEATMIDRKIGDKPINFEVTIGNYGNQIDGVTKP
VLRRKKEGGDGDEEESELLHNSSEDEADEDGEMVSVSSSQPMKPLVTDRNYFHLPYFEKK
PCIYIKSWWQDQRRRLYNANIMDKIADKLEEGLNDVQEMIKTEKPHPERRLRGVLEELSS
GCLRFVTLADKDQHHSSRTRLDRERLKSCMRELENMGQQATTLRSQVKKNTMKDKLKQVQ
NFLQKLRFLADEPQHTIPDIFVWMMSNNKRIAYARVPSKDILYSIVDEEMGKDCAKVKTV
FLKLPGKRGFGPAGWTVQAKMEIYLWLGLNKQRKDFLSGLPCGFEEKKTTRGQNLPSFPP
ISLLYTKKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFTSQSQCTEVLNETLCPTWDQ
LLVFDNVELYGEAHEMRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMSDEQYCPPRF
PPQLEYYQIYRGNSTAGDLLAAFELLQIGSGGKSDLPPIDGPTDVDRGPILPVPLGIRPV
LSKYRVEILFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSALIQNYKKNPNFSTLVKWFE
VDLPENELLHPPLNIRVVDCRAFGRYTLVGSHTVSSLRKFIYRPPDKKAQHWNMTAKQLK
GYMAMANGAPRSHPTGEIIVNMEPEVPIKKMETMVKLEANSDAVVKVDVSEEEKEKKKKK
KKGGGGGGGGGGGGGEEIEEEEPDESMLDWWSKYFASIETMKEQLRQQEAAAAEAEEKEE
MEIAEGFKGQTKNKEKSKAPKDDKKKKQQSAPELPEKKNKQKIDELKVFNKELEAEFDNF
EDWLHTFNLLRGKIGDNDDNATEEERIVGRFKGSMCVYKVPLPDDITKEAGYDPTFGMFQ
GIPSNDPINVLVRVYIVRATDLHPADINGKADPYIAIKLGKTDIKDKENYISKQLNPVFG
KSFDIEATFPMESMLTVAVYDWDLVGTDDLIGETKIDLENRYYSKHRATCGVSQTYSIHG
YNIWRDPMKPSQILSKLCKEGKVDGPHFGPGGRVKVANRVYTGPTEIEDENGQKKQTDEH
LALTVLRHWEDVPRAGCKLVPEHVETRPLLNPDKPGIEQGRLEMWVDMFPMDMPAPGPAI
DISPRKPKKYELRVIVWNTDEVILEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHS
LTGEGNFNWRYIFPFDYLMAEEKIVISKKESMFSWDETEYKIPARLTLQVWDADHFSADD
FLGAIELDLNRFPRGAKTSKQCSLEMVTNEAELPMVSIFKQKRVKGWWPFVARDENDELE
ITGKVEAELHLLTAEEAEKSPAGLARNEPDPLEKPNRPDTSFIWFLNPLKSIKYLICTRY
KWLIIKIVLALLLLIMVALFLYSMPGYMVKKLLGA
NT seq
6048 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcagctgcagctccgcaccgtctccggcctccgcggcagagcggatcgcatc
gccaaagcggctttccgagggctctccttctacacccgagtgctggaaaactgtgaggat
gaggccaggtttgacgagaccttccgctggccagttgcaagcaacattgatgggaatgag
atcttggagatccaggtcttcaactacagcaaagttttcaccaataggcttatcggcact
ttccggatggtcctgcaaaaggtggtggaggaagggcacgtggaggtgatggatacgctc
atagatgacaataattcggccatccagaccagcatctccatagagatcaggtaccaggct
ctggatgggacagtgggcacgtggaatgacaaggaattcctggagactcccagtgtccac
tcagaaggggacggcaggtaccctctggagacagacagcctcctctccggccatcggcag
ggcacagacgggtctgtgggcaaatccaaccagcagtctgcagagagaagcttcaggaga
gctgggaaaggagttttttcagccatgaagcttggcaaggcacgtcccacaaaagatgac
catcggaagcaagatgaacctgctgttctggaggcagaagacctggaccgaaaagtcatg
agacttggaggggggctggacccagacaccatctccttggcctctgtcacagctgtcacc
accaatgtctcaaacaagaggtccaaacctgacatcaaaatggagccaagtgctgggagg
ccgatggattaccaggtcagcatcactgtcattgaggcccggcagctggttgggctcaac
atggaccccgtggtctgtgtggaggttggggaggagaagaagtatacatccatgaaggaa
tcgactaactgcccttactacaacgagtactttgtcttcgatttccatgtgcccccagat
gtcatgttcgataagatcatcaagctgtctgtgatccactcaaaaaacctcctgcgcagt
gggactttggtgggctccttcaagatggacgttgggacagtttacacccagcctgagcac
cagttctaccacaaatgggctatcctttctgaccccgaggatctcactgctgggctgaaa
ggttacctgaagtgtgacatcgctgtggtggggaaaggggacaatatcaagacaccccac
aaagccaacgagacagaggaagatgatattgaagggaacctcctcctaccagatggggtt
cctccagagaggcagtgggctcgtttctacatcaagatctatcgagcagagggcctgcct
cgtatgaacaccagcatcatggccaatgtgaagaaggctctcattggagagaacaaggac
ttggtagacccctatgtgcaagtggcatttgcagggcagaaggggaagacatcagtgcaa
aaaagcagctatgagcctctctggaatgagcaaatcatcttcacagaaatgttcccccca
ttgtgcaagcggataaagatccagatccgagactcagacaaagtcaatgatgtggccatt
ggtacccatttcattgatttgaggaagatctctaatgaaggagacaaaggctatctgccc
acctttggccctgcatgggtgaacatgtatggctccactcggaactacaccctgatggat
gaacaccaagagctgaacgagggactgggggaaggcgtctccttccgggccaggcttctg
atgagccttgctgttgagatattggataccaccaacccagagatcaacagctccactgag
gtgcaagtggagcaggccacaccagttgctgacaactgcactggaaagatggaggaattc
tttctttttggagccttcctggaagctaccatgatcgacaggaagattggtgacaaaccc
atcaactttgaggttacaataggcaactatgggaaccagattgatggcgtgaccaaacct
gtcctgcggaggaagaaggagggtggggatggggacgaggaggagtccgagctgctgcac
aactccagtgaggatgaagctgatgaggatggagagatggtctctgtctcctcatctcag
cccatgaagcccctggttacagacaggaactacttccacctgccgtactttgagaagaag
ccctgcatctacatcaagagctggtggcaggatcagcgccgcaggctgtataacgccaac
atcatggacaagattgcagacaagctggaggaagggctcaatgatgtacaggaaatgatc
aagacagagaaacctcatccagagcgccggctccgaggggtcctggaggagctgagcagc
gggtgcttgcgctttgtgacgctggctgacaaggaccagcaccactcttctcgcacgagg
ttggaccgggagaggctcaagtcctgcatgcgggagctggagaatatgggccagcaagcc
acgactctgcggtcgcaggtgaagaagaacaccatgaaagacaagctgaagcaggtgcag
aacttcctgcagaaactccgtttcttggcagacgagccccagcacaccatccccgacatc
ttcgtctggatgatgagcaataacaagcgcattgcctatgcccgtgtcccttccaaggac
atcctctactccattgtggatgaggagatgggcaaggattgcgccaaagtgaagaccgtc
ttcctcaagctgcctgggaagaggggttttgggcctgctggctggacagttcaggccaag
atggagatttacttgtggctgggcctcaacaagcaacgcaaagacttcctgagtggcttg
ccctgtggcttcgaggagaagaagaccaccagaggccaaaacctgccgtccttccctccc
atcagccttctttacaccaagaagcaagttttccagctacgagcccacatgtaccaggcc
aggagtttatttgctgctgacagtagtggcctttcagacccctttgcccgagtcttcttc
acctcccagagccaatgcactgaggttctcaatgagaccctgtgcccaacctgggaccag
ctgctggtttttgacaatgtggagctgtacggagaagcccatgagatgcgggacgaccct
cctataattgtcattgagatctatgaccaggacacagtgggcaaagctgacttcatgggc
cgcacctttgccaaaccagtggtgaaaatgtcagatgagcagtactgcccaccacgcttc
cccccacagctggaatactaccagatctaccggggcaactctacagcaggagaccttctg
gctgccttcgagctgctccagattggttctgggggcaagtcagacctgcccccaattgat
ggccccacagacgtagaccgaggccccatcctgccggtgccactggggattcggccggtg
ctgagtaaatacagagtggagatcttgttctggggactcagggacctgaagagagtgaac
ctggcccaggtggaccgaccccgtgtggacattgagtgtgctgggaagggggtccagtca
gccctcatccagaactacaagaaaaacccaaacttcagcactttggtcaagtggtttgaa
gtggacctcccagagaatgagctgctccacccgcccctgaacatccgagtggtggactgc
cgggcttttgggcgctacaccttggtgggctcccatactgtcagctccctccgaaagttc
atctaccgcccaccagataagaaagcccagcactggaatatgacagctaaacagctcaaa
ggctatatggcaatggccaatggggcccctcgctctcaccccacaggggagatcattgtc
aacatggaacctgaggttcctatcaagaagatggagaccatggtgaagctagaagctaac
tctgatgcggtggtgaaggtggatgtgtctgaagaagagaaggagaaaaagaaaaagaag
aagaaaggaggaggaggaggaggaggaggaggaggaggaggaggagaagagatagaagag
gaggagccagatgagagcatgctggactggtggtccaagtattttgcttcaattgagacc
atgaaagagcaactccggcagcaggaagcagctgcagcagaagcagaggagaaagaagag
atggagattgcagagggcttcaagggccagacaaagaacaaggagaagtccaaggcaccc
aaagatgacaagaaaaagaagcagcagtcagctcctgagctccccgagaagaagaacaag
cagaagattgatgaactgaaggtcttcaacaaagagctggaagcagagtttgataacttt
gaggactggctgcacaccttcaacctgctccgtgggaagattggggacaatgatgacaat
gcaacagaagaagagcggatagtgggaaggttcaaaggctccatgtgtgtctacaaagtg
cctctccctgatgatattaccaaggaggcaggatacgaccccacctttggcatgttccag
gggattcccagcaatgaccccatcaacgtgctggtccgagtctatattgtgagggccaca
gacctccacccagctgacatcaatgggaaagctgacccttatattgccatcaagctgggg
aagacagacatcaaagacaaggagaactatatctccaagcagctgaaccctgtctttgga
aagtcctttgacattgaggccaccttccccatggagtccatgctgacagtggcagtgtac
gactgggacttggtggggacagatgacctcattggggagaccaagattgacctggagaac
cgctactacagcaagcaccgagctacatgtggggtgtcacagacttactccatacatggg
tataacatctggcgtgaccccatgaagccctcccagatcctatccaagctgtgcaaagag
ggcaaggtggatgggccacacttcgggccaggaggaagagtgaaagttgccaacagggtg
tacactggtcccacggagattgaggatgaaaatggtcagaagaagcagacagatgaacac
ttggccctgaccgtgctgcgccactgggaggatgtcccacgggcaggctgcaagctggtc
cctgagcacgtggaaacgcgcccactgctgaaccctgacaagccgggcattgagcagggt
cgcctggagatgtgggtggacatgttccccatggatatgccagcacctggccctgccatt
gatatttcccccaggaaaccaaagaaatatgagctcagagtgatagtgtggaacacagac
gaggtcatcctggaagatgatgattacttcactggcgagaaatccagtgacatttttgtc
agggggtggctgaagggtcagcaggaggacaagcaagacacagatgttcattaccactca
ctgaccggtgaaggcaacttcaactggcgttacatcttcccctttgactacctgatggca
gaggagaagatcgtcatctccaagaaagaatccatgttctcctgggatgagaccgagtac
aaaatcccggctcgcctcaccctgcaggtctgggatgctgaccacttctcagcagatgat
ttccttggggccattgagttggacctgaaccgctttccacggggagccaagacatccaag
cagtgcagtctggaaatggtgacaaacgaagcagagctgcccatggtctcaatcttcaag
caaaagagggtgaagggctggtggccatttgtggccagggatgagaatgacgagctggag
atcaccgggaaagtcgaagctgaactgcacctcctgactgcagaggaagcagagaaatcg
cccgctgggctggctcgcaatgagcccgacccactggagaaacccaaccgtccagacacg
tctttcatctggttcctcaatcctctcaagtccatcaaatacctcatctgcacccgctac
aagtggctcatcatcaaaatcgtgctggccctgttgctcctcatcatggtggccctcttc
ctctacagcatgccaggctacatggtcaagaagctcctgggggcatga
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integrated database retrieval system
