Pseudomonas coronafaciens pv. oryzae: POR16_11720
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Entry
POR16_11720 CDS
T08147
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof00270
Cysteine and methionine metabolism
pcof00450
Selenocompound metabolism
pcof00670
One carbon pool by folate
pcof01100
Metabolic pathways
pcof01110
Biosynthesis of secondary metabolites
pcof01230
Biosynthesis of amino acids
pcof04980
Cobalamin transport and metabolism
pcof04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
POR16_11720 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
POR16_11720 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
POR16_11720 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
POR16_11720 (metH)
04980 Cobalamin transport and metabolism
POR16_11720 (metH)
Enzymes [BR:
pcof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
POR16_11720 (metH)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QGL56972
LinkDB
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Position
complement(2574473..2578192)
Genome browser
AA seq
1239 aa
AA seq
DB search
MSDRSARHQAFLTALKQRILILDGGMGTMIQSYRLEEQDYRGKRFSDWPSDVKGNNDLLI
LTRPDVIGAIEKAYLDAGADILETNTFNATQVSQADYGMESIVYELNVEGARLARKVADA
KTLETPDKPRFVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGADL
ILIETIFDTLNAKAAIFAVQGVFEELGFELPIMISGTITDASGRTLSGQTTEAFWNSISH
AKPVSVGLNCALGASELRPYLQELANKANTHVSAHPNAGLPNAFGEYDELPSQTAKIIEE
FAQSGFLNIVGGCCGTTPAHIKAIAEAVSGYAPREIPDIPKACRLSGLEPFTIDRQSLFV
NVGERTNITGSARFARLIREDNYTEALEVALQQVEAGAQVIDINMDEGMLDSKKAMVTFL
NLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFIHHARLCKRYG
AAVVVMAFDEQGQADTEARKKEICKRSYDILVNEVGFPPEDIIFDPNIFAIATGIEEHNN
YAVDFINACAYIRDELPHALTSGGVSNVSFSFRGNNPVREAIHSVFLLHAIRNGLSMGIV
NAGQLEIYDQIPAELRDCVEDVVLNRNPEGTDALLAIADKYKGDGSVKEAETEEWRSWPV
NQRLEHALVKGITTHIVQDTEESRLGFKRPIEVIEGPLMSGMNVVGDLFGAGKMFLPQVV
KSARVMKQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIV
DLGVMVPAEKILQVAREQKCDIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTS
KAHTAVKIEPKYSNDAVIYVTDASRAVGVATQLLSKELKPAFIEKTRLEYVEVRERTSAR
SARTERLSYGAAVAKKPQFDWENYTPAQPTFTGTRILQDIDLNVLAEYIDWTPFFISWDL
AGKYPRILTDEVVGEAATALFEDARQMLRKLIDEKLISARAVFGFWPANQVNDDDLEVYG
DDGKPLARLHHLRQQTIKPDGKPNFSLADFVAPKDSGLTDYIGGFITTAGIGAEEVAKAY
QDNGDDYNSIMVKALADRLAEACAEWLHQQVRKEYWGYAKDEALDNEALIKEQYMGIRPA
PGYPACPDHTEKGTLFALLDPLPEGTPEHTPGKSGVFLTEHYAMFPAAAVSGWYFAHPQA
QYFAVGKVDKDQVESYTARKGQDLSVTERWLAPNLGYDE
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgcagcgcccgccatcaagcctttcttactgctctcaaacagcggattctg
atcctcgatggcggcatgggcaccatgatccagagctacaggctcgaggagcaggactac
cgtggcaagcgcttcagcgactggccaagtgacgtcaaaggcaacaacgacctgctgatc
ctgacgcgtccagacgtgataggcgccatcgaaaaggcttatctggatgcgggcgcagac
attctcgagaccaacactttcaacgcgacgcaggtgtcccaggccgactacggcatggag
tcgatcgtttatgagctgaacgtcgaaggtgcccggctggcgcgaaaagtggcagacgcc
aagactctcgaaaccccagacaaaccacgctttgtcgccggcgtcctcggcccgaccagc
cgcacctgttcgctgtcgccggatgtcaacaaccctggctatcgcaatgtcaccttcgac
gaactggtcgagaactacaccgaggccaccaagggcctgatcgaaggcggcgccgatctg
atcctgattgaaaccatcttcgacacactcaacgccaaagccgcaatctttgccgtgcag
ggcgtgttcgaagagctgggcttcgagctgccgatcatgatttccggcaccatcaccgac
gcctcaggccgtaccctgtcggggcagactaccgaagctttctggaactcgatcagccat
gccaaaccggtctcggtcggcctgaactgcgcgctgggtgccagtgaactgcgaccttac
ctgcaggaactggccaacaaggccaacacccatgtttcagcgcaccccaatgctggcttg
ccgaacgcctttggcgaatacgacgagctgccgagccagacggcaaaaatcatcgaagag
ttcgcccaaagcggctttttgaacattgtcggtggttgctgcggcacgacgcccgcgcac
atcaaggcgattgccgaggctgtatcgggttatgccccgcgtgaaattccggacatcccg
aaagcctgtcgcctgtcgggtcttgagccgttcaccattgatcgccagtcgctgttcgtc
aacgtcggcgaacggaccaacatcaccggctcggcccgcttcgcccgcctcattcgtgaa
gacaactacaccgaagccctggaagtcgccctgcaacaggtcgaagccggcgcccaagta
atcgacatcaacatggacgaagggatgctcgattcgaagaaggccatggtgaccttcctc
aacctgatcgcaggcgagccggatatctctcgcgtaccgatcatgatcgactcgtccaag
tgggaagtcatcgaggccggcctcaagtgcattcagggcaagggcatcgtcaactcgatc
agcatgaaggaaggcgtcgagcagttcattcatcacgcccgcctgtgcaagcgttacggt
gcagcggtagtggtgatggccttcgacgaacagggccaggccgataccgaagcgcgcaag
aaggagatctgcaagcgctcctacgacatattggtcaatgaagtgggcttcccgccggaa
gatatcatcttcgacccgaatatcttcgccattgccactggcatcgaagagcacaacaac
tatgccgtggacttcatcaatgcctgtgcctatatccgcgatgagctgccgcatgccctg
acctcgggcggggtgtccaacgtctcgttctcgttccgcggcaacaacccggtgcgtgaa
gccattcactcggtgttcctgctgcatgcgatccgtaatggcctgagcatgggcatcgtc
aacgccggtcagctggaaatctacgaccagatcccggccgagctgcgggactgcgtcgaa
gacgtcgtgctcaaccgcaaccctgaaggcaccgatgcgttgctggccattgccgacaag
tacaagggcgatggcagcgtcaaggaagccgaaaccgaagagtggcgcagctggccggtc
aaccagcggctggaacacgcgctggtcaagggcattaccacgcacattgttcaggacacc
gaagagtcgcgcctggggttcaaacgacctatcgaggtcatcgagggcccgctgatgtca
ggcatgaacgtggtcggcgacctgttcggcgcgggcaagatgttcctgccacaggtggtg
aagtcggcacgtgtgatgaagcaggcggtggcgcacctgatcccgttcatcgaactggaa
aaaggcgacaagcccgaagccaagggcaagatcctgatggccacggtcaagggcgatgtt
cacgacatcggcaagaacatcgtcggcgtggtgctgggctgtaatggttacgacattgtc
gaccttggcgtgatggtgcctgccgagaagatcctgcaggtcgctcgcgaacagaaatgc
gacatcatcggcctttccgggctgattaccccatcgctggacgagatggtgcatgttgcc
cgggaaatgcagcgtcaggatttccatctgcccttgatgatcggcggcgcaaccacatcc
aaagcccacaccgcggtcaagatcgaacccaaatacagcaacgatgcggtgatctacgtc
accgacgcgtctcgtgcggtcggtgtcgcgacccaactgctttccaaggagctgaagccg
gctttcatcgagaagacccgccttgagtatgtcgaagtacgtgagcgcacctcggcacgc
agcgcgcgcaccgaacgccttagctatggcgcggcggtggccaagaagccgcagttcgac
tgggaaaactacacccccgcccagccgacattcaccggcacacgtatcctgcaggacatc
gacctgaacgtactggctgagtacatcgactggacgccgttcttcatctcctgggatctg
gccggtaaatacccgcgcatcctgaccgatgaagtggtcggtgaagcggctaccgcgctg
tttgaagatgcccgccagatgctgcgcaagctgatcgatgaaaagcttatcagcgcccgc
gcggtgttcggtttctggccggccaaccaagtcaatgacgacgatctggaggtctacggc
gacgacggcaaaccgctggccaggcttcaccacttgcgtcagcagaccatcaagcccgac
ggcaagccgaacttttcgctggccgacttcgttgcgcccaaagacagcggcctgaccgat
tacattggtggttttatcaccaccgccggtatcggtgccgaagaagtggccaaggcctat
caggacaatggcgacgactacaactcgatcatggtcaaggccctggccgaccgtctcgcc
gaagcctgcgccgaatggctgcaccagcaggtgcgcaaggaatactggggctatgcgaaa
gacgaggcgctggacaacgaagcgctgatcaaggagcagtacatgggtattcgccctgcc
ccgggctaccctgcgtgccctgatcacaccgaaaaaggcaccctgttcgccttgctcgac
ccgctaccggaaggtacaccggagcacacgccaggtaaaagcggcgtgttcctgaccgag
cactacgccatgttcccggccgctgcggtcagtggctggtattttgctcatccgcaggcg
cagtactttgctgtaggcaaggtcgacaaagatcaggtcgaaagctacaccgcacgcaag
ggccaagacctgagtgtcactgaacgctggctggcccccaaccttggctacgacgagtaa
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integrated database retrieval system