Pseudomonas coronafaciens pv. oryzae: POR16_13265
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Entry
POR16_13265 CDS
T08147
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Module
pcof_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcof02000
]
POR16_13265
01504 Antimicrobial resistance genes [BR:
pcof01504
]
POR16_13265
Transporters [BR:
pcof02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
POR16_13265
Antimicrobial resistance genes [BR:
pcof01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
POR16_13265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QGL57241
LinkDB
All DBs
Position
2938845..2942036
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AA seq
1063 aa
AA seq
DB search
MNFSKFFISRPIFAAVLSLLILIAGAISLFKLPISEYPEVVPPTVVVRANFPGANPKVIG
ETVASPLEQAITGVEGMLYMSSQATADGKLTLTITFALGTDLDNAQVQVQNRVTRSEPKL
PEEVTRIGITVDKASPDLTMVVHLTSPDKRYDMLYLSNYAVLNIKDELARLGGVGDVQLF
GMGDYSLRVWLDPNKTASRNLTATDVVNAIREQNRQVAAGQLGSPPSPNATSFQMSINTQ
GRLVSEEEFENVVVRAGADGEITRLKDIARIELGSSQYALRSLLNNQPAVAIPIFQRPGS
NAIDISNDVRARMAELKKSFPEGMDYSIVYDPTIFVRGSIEAVIHTLFEALILVVLVVIL
FLQTWRASIIPLVAVPVSLIGTFAVMHMFGFSLNALSLFGLVLAIGIVVDDAIVVVENVE
RNIELGLEPVAATHKAMAEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAIST
VISAFNSLTLSPALAAVLLKGHDAPKDRFSRFLDKMLGGWLFRPFNRFFEKASHGYVGTV
ARVIRSSGIALLVYAGLMVLTWVGFASTPTGFVPSQDKQYLVAFAQLPDAASLDRTEDVI
KRMSELALKQPGVQDAIAFPGLSINGFTNSPNNGVVFVTLKPFDERKDASLSANAIAGAL
NGQFASIQEAYMAIFPPPPVQGLGTIGGFRLQIEDRGNLGYDELYKETQNVIAKSRSVPE
LAGLFTSYTVNVPQVDAAIDREKAKTHGVAVSDIFDTLQVYLGSLYANDFNRFGRTYQVN
VQAEQQFRQDADQIGQLKVRNNLGEMIPLATFVKVSDTAGPDRVMHYNGFITAEINGAAA
PGYSSGQAQAAVEKLLREELPTGMVYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ
YESWSLPLAVILIVPMTLLSAIAGIMIAGSDNNIFTQIGLIVLVGLACKNAILIVEFAKD
KQAEGMSPLDALLEACRLRLRPILMTSFAFIMGVVPLVLSSGAGAEMRHAMGVAVFSGML
GVTFFGLLLTPVFYVLIRNYVERKEARKATRAQTLQNLPAETH
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctccaaattctttatctcacggccgatctttgccgcagtgctgtcgctgctg
atcctgatcgccggtgcaatatcgctcttcaagctgcctatcagcgaatacccggaagtg
gtgccgccgacggtggtggtgcgtgccaatttccccggcgccaaccccaaggtcatcggc
gaaaccgtcgcttcgccgctggagcaagccattaccggtgtagaaggcatgctctacatg
tcctcgcaggccaccgccgacggcaagctgaccctaaccatcaccttcgcgctgggcact
gacctggacaacgcgcaggtgcaagtgcagaaccgtgtgactcgcagcgagccgaagctg
ccagaagaagtgacacgcatcggtattaccgtggacaaggcctcccctgacctgaccatg
gtcgtgcatttgacgtcaccggacaaacgctacgacatgctgtacctgtccaactacgcg
gtgctcaacatcaaggacgagctggcgcggctgggcggtgtcggtgatgtgcagttgttc
ggcatgggcgactactcgctgcgcgtgtggctcgacccgaacaagaccgcttctcgcaat
ctgaccgcgacggatgtggtcaacgcaatccgcgaacagaaccgccaggtcgcggcaggc
cagttgggctcccccccttcgccgaatgccaccagcttccagatgtcgatcaacactcaa
gggcgtctggtcagcgaagaagagttcgaaaacgtggtggttcgcgcaggtgcagacggc
gagatcacgcgcctgaaggacatcgcacgtatcgaactcggttccagccagtacgcgtta
cgctccctgctcaataaccagcctgcggtggcgatcccgatcttccagcgcccaggctcc
aacgccatcgatatctccaacgatgttcgggcgcgaatggccgagttgaagaagagcttc
cccgaaggcatggactacagcattgtctatgacccgaccatcttcgtacgtggctctatc
gaggctgtgatccacacgctgttcgaggccctgattctcgttgtcctggtagtgattctg
ttcctgcaaacctggcgcgcctcgatcatcccgttggtggcagtaccggtttcgctgatc
ggcacgttcgccgtgatgcacatgttcggattttcgctgaacgcgctgtcattgtttggg
ctggtgctggcaatcggtatcgtggtggacgatgcgattgtggtggtggagaacgtcgag
cgtaacatcgaactggggcttgaaccggtcgcagccacccacaaggcgatggccgaagtg
acggggccgatcatcgctacagcactggtgctgtgtgccgtgttcgtaccggcagcgttc
atctccgggctcacggggcagttctacaaacagttcgcgctgaccatcgccatctccact
gttatctcggcgttcaattcgctgaccctgtcgccggcactggccgccgttctgctcaaa
ggtcatgacgcccccaaggaccgcttctcgcgtttcctcgacaaaatgcttggcggctgg
ttgttccgcccgttcaaccgcttcttcgaaaaagccagtcatggttatgtaggcactgtc
gctcgggtcattcgcagcagcggcattgccttgctggtgtacgcggggcttatggttctg
acctgggtgggttttgccagcacaccgaccggcttcgtacctagtcaggacaagcaatac
ctggttgcatttgcccagttgccggacgccgccagcctcgaccgtaccgaggacgtcatc
aagcgcatgtcggaactggccctcaagcagccaggcgtgcaggacgcaattgccttcccc
ggcctgtcgatcaatgggttcaccaacagtcccaacaacggcgtggtattcgtgaccctc
aagccgttcgatgaacgcaaggacgccagcttgtcggcaaacgccatcgcaggcgccctg
aacggccagttcgcgtctattcaagaagcctacatggcgatcttcccgcctccgccggta
caaggcctgggcactatcggcggcttccgcctgcagatcgaggaccgtggcaacctgggt
tatgacgagctgtacaaggaaacccagaacgtcattgccaagagccgcagcgtgccggaa
ctggcggggctgtttaccagctacaccgtcaacgtgccgcaggtcgacgccgcgatcgac
cgcgaaaaggccaagacccacggcgtggcagtcagcgatatcttcgacaccctgcaggtg
tacctgggctcgctgtatgccaacgacttcaaccggttcggccgcacctatcaggtcaac
gttcaggccgagcagcagttccgccaggacgccgaccagatcggccagctcaaggtgcgc
aacaacctcggagaaatgatcccgctggcgaccttcgtcaaggtcagtgacaccgccggc
cctgaccgggtcatgcactacaacggctttatcacggccgagatcaatggtgctgcagcg
ccagggtatagctctggtcaggcccaggcagcagtggaaaaactgctgcgtgaggaactg
cccaccggcatggtctacgagtggaccgacctgacctatcagcagatcctttcgggcaac
actgcgctgttcgtattcccgctctgtgtgttgctggcgtttctggtgctggcggctcag
tacgaaagctggagcctgccactggcggtaatcctgatcgtacctatgaccctgctttcg
gcaattgccgggataatgattgccggcagcgataacaacatctttacccagatcgggctg
atcgtactggtgggcctggcgtgcaagaacgcgattctgatcgtcgagttcgccaaggac
aaacaggctgagggcatgagcccgctggacgccttactggaagcctgccgcctgcggctg
cgtccgatcctgatgacttcgttcgcgttcatcatgggcgtcgtgcctctggtgctgtcc
agcggtgcaggcgccgaaatgcgccatgcgatgggggtcgcagtgttctccgggatgctg
ggcgtgaccttcttcgggctgctgctgacgccggtgttctacgtgctgatccgtaattac
gtcgagcgcaaggaggcccgcaaggccacccgtgcacagactctgcaaaacctgcccgcg
gagacgcattga
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