Segatella copri: LK433_09895
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Entry
LK433_09895 CDS
T07933
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pcoi
Segatella copri
Pathway
pcoi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LK433_09895 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoi03400
]
LK433_09895 (nth)
Enzymes [BR:
pcoi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LK433_09895 (nth)
DNA repair and recombination proteins [BR:
pcoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LK433_09895 (nth)
Prokaryotic type
LK433_09895 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Flavodoxin_4
RecR_HhH
HHH_8
Ist1
DUF3349
Motif
Other DBs
NCBI-ProteinID:
UEA42289
LinkDB
All DBs
Position
complement(2338069..2338716)
Genome browser
AA seq
215 aa
AA seq
DB search
MLRKERYDFILNHFRSALPNVTTELQFGSAFQLLVATLLSAQCTDKRINMVTPALFARYP
DAQHMAQASEEDIYELISSVSYPNAKAKHLAEMSRQLVEMFGGEVPEAADDLEKLAGVGR
KTANVIRAVWFGHATMAVDTHVYRVSHRMGLVPKTADTPRKVEDYLMKHIPAEDIPNAHH
WILLHGRYICKSTKPLCDKCFFNEYCPKLLKDSKL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtaaggaaagatacgattttatattgaatcatttcagaagtgcgctgccgaat
gtaactaccgagttgcagttcggtagcgcatttcagcttctggtggctactttgctttct
gcgcaatgcaccgacaaacgcatcaacatggttacgcctgctctctttgcccgttatcct
gatgcgcagcacatggcacaggcgagcgaggaagatatttatgagttgatcagttcggtg
agttatccgaatgccaaggcgaagcatcttgctgaaatgtctcgccagctggttgagatg
ttcggaggtgaggtacctgaggctgcggatgatttggagaagttggcaggagtggggcgc
aagacggcgaatgtgattcgtgccgtatggttcggtcatgctacgatggcggtggatacg
catgtttaccgtgtgagtcatcgtatggggttggtgccgaaaacggcagatacgccccga
aaagtagaagattatctgatgaaacacattccggctgaggatattccgaatgcgcatcat
tggattctgctgcatggcagatatatttgcaagagtacgaaaccgctctgcgataaatgc
ttttttaatgaatattgtccaaaactattaaaggacagtaaactttag
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