Segatella copri: LK433_13265
Help
Entry
LK433_13265 CDS
T07933
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pcoi
Segatella copri
Pathway
pcoi01501
beta-Lactam resistance
pcoi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LK433_13265
01503 Cationic antimicrobial peptide (CAMP) resistance
LK433_13265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoi02000
]
LK433_13265
01504 Antimicrobial resistance genes [BR:
pcoi01504
]
LK433_13265
Transporters [BR:
pcoi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LK433_13265
Antimicrobial resistance genes [BR:
pcoi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LK433_13265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
UEA42913
LinkDB
All DBs
Position
complement(3169748..3173014)
Genome browser
AA seq
1088 aa
AA seq
DB search
MSFTNFIKRPVLSTVVSIFFVLLGIIGLVSLPIEQYPNIAPPTITVNADYTGADAQTVLN
SVVAPLEESINGVENMTYMTSSASNSGDAEITVYFKQGSDPDMAAVNVQNRVSQAQSLLP
AEVTRVGVTVTKRQSSNVIMFALTTDDGRYDDQFVTNYALINVIPQLKRINGVGDVQSPS
ARNYSMRIWLKPEKMKEFGLVPSDVSQALAEQNIEAAPGSFGESSDMQYEYTLRYKGRLK
TPMEYENILIKSNTSGQTLRLGEIAKVELGGLQYNVNLLNDGQPAVLGMVQQIAGSNATQ
IASDVKKTLDELEKSYPPGLKNVILMDVTEFLFASIEEVIFTLIITLVLVFIVVYIFLQD
FRSTLIPMIAVPVALVGTFLFLWIFGFSINLLTLSALLLAIAIVVDDAIVVVEAVHAKLD
QGYKSALTAAIDAMNEISSAIISITLVMSAVFVPVSFIGGTSGYFYREFGVTMAVSIVIS
AINALTLSPALCAVLLKPHEEGHEKKMSFIDRFHAGFNYQFDKITNKYKGGVKWVINHGI
IAGSLVAVSIVGLVALMGTTKTGLVPDEDTGTIFACISTAPGTSQERTAEVVKQVDKMLA
SNPAIATRNAIMGYSFIGGAGSNQGTIIVKLKPFEERPGGFFHRIKEACTGGGIEALFVN
PMEYTSVLGMIYKQTATIKDAQVLAFAPPMISGFSMQNGITMTMQDKTGGDLNKFFDNVK
KFLAELNKRPEIQTAQTQYNPNYPQYMVDVDVAKTKQAGISPSTVLSVMQGYLGGLYASN
FNAYGKLYRVMIQAGPESRMRPDDLSKIYVRCADGTMSPVSEFVNLKKVYGPANITRFNL
FTSMDVSVTPNSGYSTGDGMKAIAEVAKETLPEGYGYEYSGLTRSEAESSNSTGLIFALC
IVFVYLILSAQYESYILPLSVVLSIPFGLAGAFIFTNLFGHSNDIYMQISLIMLIGLLAK
NAILIVQFALERRRTGMAIKYSAILGAGARLRPILMTSLAMVIGLLPLMFASGVGKNGNQ
TLGAAAVGGMLLGTICQIFVVPALFAVFQWLQEKLTPMKFEDELNEEVAAELEQYANAAH
QKKGIDKK
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacaaactttataaaacgcccggtactttcgacggtggtttccatcttcttc
gtcttgctgggtattatcggcttggtatcgctgcctatcgagcagtatccgaatatcgcg
ccgcctaccatcacggtaaatgctgactatacgggtgcagatgcccagacggtgttgaac
tctgtcgttgctccgctggaggagagtatcaacggtgtggagaacatgacttatatgacc
tcttccgcgtctaactctggtgatgctgagatcaccgtttacttcaagcagggttccgac
ccagatatggctgcggtcaacgtacagaaccgtgtatctcaggcgcagtctctgctgcct
gccgaggttaccagggtgggtgtcactgtaaccaagcgtcagagttctaacgtcatcatg
ttcgctctgactacagacgatggccgttatgacgaccagtttgttaccaactacgccctg
atcaacgtcattcctcagttgaagcgtatcaatggtgtgggtgatgtgcagagcccttct
gcccgtaactactctatgcgtatctggttgaagccagagaagatgaaggagttcggactg
gttccttctgatgtttctcaggctttggcagagcagaatatcgaggctgcccctggtagc
tttggtgaaagctctgatatgcagtatgaatataccttgcgctacaagggtcgtttgaag
actccaatggagtatgagaacatccttatcaagagcaatacttccggtcagacgctccgt
ttgggcgaaattgccaaggttgagttgggtggtttgcagtataacgtaaacctgctcaat
gatggtcagcctgccgtgctgggtatggttcagcagattgccggttccaacgctacccag
attgccagcgacgtaaagaaaacgcttgatgaactggagaagagttatcctcctgggttg
aagaatgttatcctgatggatgttactgagttcttgttcgcatctatcgaggaagttatc
ttcaccttgatcatcaccctggtactggtgtttatcgtagtgtatatcttcttgcaggac
ttccgttctacgctgattcctatgattgccgtgcctgtggctttggtcggtaccttcctc
ttcctctggatcttcggattctccatcaacctgcttacgctgtcagccctgctgctggct
attgcgattgtggtcgatgatgccattgtggtggtcgaggcggttcacgccaagctcgac
cagggttacaagagtgcccttactgcagctatcgatgcgatgaacgaaatttccagcgcc
atcatctctattacattggtgatgtctgccgtgttcgttcctgtatcgttcatcggtggt
acttccggttacttctaccgtgagttcggtgtaaccatggcggtatctatcgttatttcg
gctatcaatgcgttgacgctgtctcctgcactctgtgccgtgttactgaagccacacgag
gagggtcacgagaagaaaatgtctttcatcgaccgattccatgctggattcaactatcag
tttgataagattaccaataaatataaaggtggtgtcaagtgggttatcaatcatggcatc
atcgctggtagcctcgtggctgtcagcatcgtaggtctggttgccctgatgggtacaacc
aagacgggtctggtgcctgatgaggataccggtactatcttcgcttgtatctctacagct
cctggtacttctcaggaacgtacagcagaggtggttaagcaggtagataagatgctggct
agcaacccagccatcgcaacccgtaacgccatcatgggttatagctttatcggtggtgcc
ggttctaaccagggtaccatcatcgtgaagctgaagccattcgaggagcgtccgggtgga
ttcttccaccgtatcaaggaggcttgtaccggtggcggtatcgaggcgctgtttgtcaac
cctatggagtatacctctgtattgggtatgatctacaagcagactgctacaatcaaggat
gcacaggtgcttgcctttgctccacctatgatttccggtttctctatgcagaatggtatt
accatgactatgcaggataagactggtggcgacttgaataagttctttgataatgtgaag
aagttcctggctgagttgaacaagcgtcctgagattcagaccgcccagactcagtataac
cctaactatccacagtatatggtagatgtagatgttgccaagaccaagcaggctggcatc
tctccatcaacagtattgtctgtcatgcagggttatcttggtggtctctacgcatctaac
ttcaatgcctacggtaagctctaccgtgtcatgattcaggctggacctgagagtcgtatg
cgtccagacgatctgagcaagatttatgtacgttgtgctgatggcaccatgtctcctgta
agcgagttcgtgaacttgaagaaggtttatggtccagcaaacatcacccgattcaacctg
tttacctctatggatgtatctgtaactcctaacagcggttactctaccggtgacggtatg
aaggcgattgctgaggttgccaaggagacattgccagagggttacggctatgagtactct
ggtttgacccgttctgaggctgagtccagcaactctacaggtttgattttcgcactctgt
atcgtattcgtttacctcatcttgagtgcccagtacgagagttacatcttgcctctgtca
gtagtattgtctatcccattcggtttggcaggtgcgttcatcttcaccaacctcttcggt
cactctaacgatatctacatgcagatttcgttgattatgttgatcggtctgttggctaag
aacgccatccttatcgtacagttcgccctcgagcgtcgtcgtacgggtatggctatcaag
tactcagctatcctgggtgccggtgcccgtctccgtcctatcctgatgacctctctggcg
atggttatcggtctgttgcctctgatgttcgcatcaggtgtaggtaagaatggtaaccag
accctgggtgctgccgccgtaggtggtatgttgctcggtacaatctgccagatcttcgtg
gttcctgctctcttcgcagtcttccagtggttgcaggagaagttgaccccaatgaagttc
gaggatgagttgaacgaggaggtagctgccgagttggagcagtatgccaacgcagctcat
cagaagaagggtatcgataagaagtaa
DBGET
integrated database retrieval system
