Segatella copri: LK433_13270
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Entry
LK433_13270 CDS
T07933
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pcoi
Segatella copri
Pathway
pcoi01501
beta-Lactam resistance
pcoi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LK433_13270
01503 Cationic antimicrobial peptide (CAMP) resistance
LK433_13270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcoi03036
]
LK433_13270
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoi02000
]
LK433_13270
01504 Antimicrobial resistance genes [BR:
pcoi01504
]
LK433_13270
Chromosome and associated proteins [BR:
pcoi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LK433_13270
Transporters [BR:
pcoi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LK433_13270
Antimicrobial resistance genes [BR:
pcoi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LK433_13270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
HlyD_2
PTS_EIIA_1
IN_DBD_C
PEX14-like_2nd
OEP
Motif
Other DBs
NCBI-ProteinID:
UEA42914
LinkDB
All DBs
Position
complement(3173048..3174259)
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AA seq
403 aa
AA seq
DB search
MKIKSVLFVAAVCVLAALTSCGGSKKGGLPDFSDDEFAVATIGTSSAALQTTYPATIKGI
QDVEVRPKVSGFITKVFVHEGQTVSAGQALFSIDSETYQAAVRSAAAAVNTAKAQANTAK
LTYQNNKKLYDSKIIGEYELSTAANSYATAKAQVAQAEAALASAREQLAWCTVTSPSAGV
VGSLPFKVGALVSASGQALTTVSNISTMEVFFSLSESQILSMSKTNGSIQAAIAAFPAVK
LQLADGSIYNHPGKVVKMSGVIDATSGSISLIAHFANPEKLLKSGGAGSIVVPNDHNSAI
VIPQEACSQVQDKIFVYIVTKDNKVKYSEIKVNPQDDGKNYIVTAGLHVGDRIVLKGITK
LTDGQQIKPITLERYNQKIAEAAKLAESQDNAHAFATAMGGKK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaaagcgttttgtttgttgcagcagtttgtgttcttgctgcgttgacatca
tgtggtggaagtaagaagggcggtctgcctgacttcagcgatgatgagttcgctgtagct
actatcggtacttccagcgccgcattgcagactacctatcctgctaccatcaagggtatc
caggatgtagaggtacgtcctaaggtttctggttttatcactaaggtttttgtacacgag
ggacagactgtatcagcaggtcaggctttgttctctattgatagcgagacctatcaggct
gctgtccgttctgcagctgccgctgtaaacacagctaaggcacaggctaatacagccaag
ttgacctatcagaacaataagaaattgtatgatagcaagattatcggtgaatatgaactc
tctacagcagctaacagctatgcaacagctaaggctcaggtagctcaggcagaggcagct
ttggcttcagcccgcgagcagttggcttggtgtaccgttaccagtccttctgctggtgta
gtaggtagtcttcctttcaaggtaggtgctctggtaagtgcttctggtcaggctcttact
accgtttccaatatcagcactatggaggtattcttctcactctctgagtctcagatcttg
agcatgtctaagaccaatggtagcattcaggcagccatcgcagcgttcccagctgttaag
ttgcagttggcagacggttctatctataatcacccgggtaaggtggttaagatgagtggt
gtcatcgatgctacttccggttctatctctctcatcgctcacttcgctaacccagagaag
ttgctgaagagtggtggtgcaggttctatcgtcgttcctaacgatcataacagcgctatc
gttatccctcaggaggcttgctctcaggttcaggataagattttcgtttacatcgtaacc
aaggataacaaggtgaagtattctgagatcaaggtcaatccacaggatgatggcaagaac
tatatcgtaactgcaggtcttcatgtaggcgatcgtattgttttgaagggtattaccaag
ttgaccgatggtcagcagatcaagcctatcactctggagcgctacaatcagaagattgct
gaggctgccaagttggctgagtctcaggataacgctcatgccttcgctactgctatgggc
ggaaagaagtaa
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