Pandoraea commovens: NTU39_09960
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Entry
NTU39_09960 CDS
T08365
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pcom
Pandoraea commovens
Pathway
pcom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NTU39_09960 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcom03400
]
NTU39_09960 (nth)
Enzymes [BR:
pcom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NTU39_09960 (nth)
DNA repair and recombination proteins [BR:
pcom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NTU39_09960 (nth)
Prokaryotic type
NTU39_09960 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Ogg-HhH
EndIII_4Fe-2S
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
UVA81298
LinkDB
All DBs
Position
complement(2113511..2114155)
Genome browser
AA seq
214 aa
AA seq
DB search
MNDAKRRALFETLQQLNPTPTTELEYTSPFELLIAVLLSAQATDVSVNKATRKLYAVANT
PAKMIALGEAGVSDFIKTIGLYRTKAKNVIATCQLLLDKHAGEVPRSREALEALPGVGRK
TANVVLNTAFGEDTIAVDTHIFRVANRTGLAPGKDPLAVELALERVTPREFKHDAHHWLI
LHGRYVCKARKPECWHCAIEPLCDFRPKTPAPKA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgccaaacgccgtgccctgttcgaaacgctgcaacaactcaatcccacaccg
acgacggagttggaatacacgtcgccttttgagttgttgattgcggtactactctccgca
caggcgaccgatgtctccgtgaacaaggcgacccgcaagctttacgccgtcgcgaacacc
cccgcaaaaatgattgcgctgggcgaagcaggcgtgtccgatttcatcaagacgatcggg
ctgtatcgcacgaaggccaagaacgtcatcgccacctgccaattgcttctcgacaagcac
gccggggaagtgccgcgatcgcgtgaagcgctcgaagcgttgcctggcgttggccgcaaa
accgctaacgtggtactgaataccgcattcggcgaggacacgattgccgtcgacacgcac
attttccgtgtcgccaaccgcacgggactggcacccggcaaggacccgctggccgtcgaa
ctggccctggaacgcgtaacacctcgcgaattcaaacacgacgcgcatcactggctcatc
ttgcacggccgctacgtatgcaaggcacgcaagccagagtgctggcattgcgcgatcgaa
ccgctctgcgacttccggccgaaaacacctgcgccgaaggcgtga
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