Pandoraea commovens: NTU39_15625
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Entry
NTU39_15625 CDS
T08365
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18903
outer membrane protein, multidrug efflux system
Organism
pcom
Pandoraea commovens
Module
pcom_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcom02000
]
NTU39_15625
01504 Antimicrobial resistance genes [BR:
pcom01504
]
NTU39_15625
Transporters [BR:
pcom02000
]
Other transporters
Pores ion channels [TC:
1
]
NTU39_15625
Antimicrobial resistance genes [BR:
pcom01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
NTU39_15625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UVA77538
LinkDB
All DBs
Position
3422049..3423596
Genome browser
AA seq
515 aa
AA seq
DB search
MQAQWMKRSLGVSGLLATLLVVAGCSMAPTYEVPTVTDKGTPTAFKEAALPAGEAGTWKT
AEPSEALARGEWWKVFGDATLDKLEADALSANQNLKAAAARVQEARGVQRQARAALFPTL
DAGFGPSRQKISPASQMQPDGTNIAPYTLWRAQASVGYEVDLFGRVSDNVAAARADAEQS
EALYRSVQLALQADVAQNYFNLRELDAEQALYTQTVTLREEALKLVQRRFTEGDIGELDV
ARAKAELATAQSDALAVARLRAASEHSLAILLGKTPAEFSFAPTPLVPVTVQVPAGLPSA
LLERRPDIAAAERAMAAANARIGVAKAAFFPSLSLTGSGGFEAATLGDLFNWSSRTFLLG
PVVGGLLSMPIFDGGARSGNLSRARAQYEEDVANYRQQVLVAFQEVEDNLSNLRLLAQQT
RAQDDAVKASGRAAQLSRTQYQEGSIAYLDVIDAERTVLQTRRSAVQLAGAQAVSTVNLI
RALGGGWGDLPKTPADGAPAAVPTANAAGATVAAR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgcaatggatgaaaagaagtctgggcgtctcgggtttgctcgccaccctgctg
gtggtggcgggctgctcgatggctcccacatacgaagtgccgacggtgaccgacaagggt
acgccgacggccttcaaggaagcggcactgcccgcaggtgaagctggcacgtggaagacg
gccgagccgtcggaagcgctggcgcgcggcgaatggtggaaggtgttcggcgacgcaacg
ctcgacaagctcgaagccgacgcattgtccgccaaccagaacctgaaggcggccgccgcc
cgcgtgcaggaagcgcgtggcgtgcaacgtcaggctcgtgccgcgctcttcccgacactt
gacgctggcttcggcccgtcgcgtcagaagatctcgcccgcctcgcagatgcagccggac
ggcacgaacatcgcgccgtacacgctgtggcgtgcgcaggcgagcgtcggctatgaagtc
gatttgtttggccgtgtgtcggacaacgtcgccgccgcccgcgccgacgctgaacaaagt
gaagcgttgtaccgctcggtgcagctcgcgttgcaagccgacgtcgcgcagaactatttc
aatctgcgcgagctcgacgccgaacaggcgctgtacacgcagacggtgacgttgcgcgaa
gaagcactgaagctggtgcaacggcgcttcaccgaaggcgacatcggcgagctggacgtc
gcccgtgccaaggccgaactggccacggcgcagtccgacgcactggcggtggcccgtctg
cgtgccgcgtccgaacacagcctcgcgattctgctcggcaagacaccggcggagttctcg
tttgcgcccacgccgctcgtgcccgtcaccgtgcaggtgcccgcaggtctgccgtcggca
ttgcttgagcgccgccctgacatcgcggccgccgagcgtgcgatggccgcagcgaatgcg
cgcatcggtgtcgcaaaggccgcgttcttcccgtcgctgtcgctgaccggttcgggtgga
ttcgaagccgccacgctgggcgatctgttcaactggtcgagccgcacgttcctgctggga
ccggtcgtcggtggtctgctctcgatgccgattttcgatggcggtgcacgtagcggcaat
ctgtcgcgtgcccgtgcgcagtacgaagaagacgtcgcgaactaccgtcagcaagtgctc
gtggcgttccaggaagtcgaagacaacctgtcgaatctgcgtctgctcgcacagcaaacg
cgtgcacaggacgatgccgtgaaggcctcgggccgcgcagcgcagctctcgcgcacgcag
tatcaggaaggctcgatcgcgtatctggatgtgatcgacgccgagcgcacggtgctgcaa
acgcgtcgcagcgctgttcagttggccggtgcgcaagccgtgtcgaccgtcaacctgatc
cgcgcactgggcggcggctggggcgatttgcccaagacgcctgccgatggtgctccggca
gccgtacccacggcgaacgcggccggtgcaacggtagcggcccgctga
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