Pandoraea commovens: NTU39_19680
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Entry
NTU39_19680 CDS
T08365
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pcom
Pandoraea commovens
Pathway
pcom01501
beta-Lactam resistance
pcom01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NTU39_19680
01503 Cationic antimicrobial peptide (CAMP) resistance
NTU39_19680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcom03036
]
NTU39_19680
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcom02000
]
NTU39_19680
01504 Antimicrobial resistance genes [BR:
pcom01504
]
NTU39_19680
Chromosome and associated proteins [BR:
pcom03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NTU39_19680
Transporters [BR:
pcom02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NTU39_19680
Antimicrobial resistance genes [BR:
pcom01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NTU39_19680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CusB_dom_1
HlyD_D23
HlyD_3
Biotin_lipoyl_2
RibLong
Motif
Other DBs
NCBI-ProteinID:
UVA78273
LinkDB
All DBs
Position
complement(4375233..4376474)
Genome browser
AA seq
413 aa
AA seq
DB search
MHVKRSSLGMVTAVALAVLTLAACGKKPQQPQAMVPEVGVVTLQPQSVTLTTDLPGRTAP
YRVADVRARVDGIVLKRDFTEGGDVKAGQRLYKIDPATYQAAYENAKATLAKAVANQAST
KLLADRYKQLVAVEAVSKQDYDNAVAAALQADADVQAGKAAVDTAKINLGYTDVPAPISG
RTGLSQVTEGAYVQSGAATLMTTVQQIDPMYVDVTQSAADGLRLRRALADGKLQSAGKNA
AKVELTLEDGTKYPLEGKLQFSDITVDQTTGSVTVRAIFPNPNRELLPGMFVHAKLQEGV
KDGGLLVPQQGVTRDQKGQPTALIVNKEGKIELRQLVTDRAIGDKWLVSSGLAAGDQVIV
SGLQKARPGSPAKAVPAQLPGAQAQQPAGASAPAAASASGASQADAASSAKAQ
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcaagagaagttcactggggatggtcactgccgtcgcactcgcggtattgacc
ctggccgcgtgcggcaagaagccgcagcagccgcaggccatggtgccggaagtcggcgtc
gtgacactgcaaccccagagcgtcacgctgacgaccgacctgccaggccgtaccgcgccc
taccgcgtcgccgacgtgcgtgcgcgcgtcgacgggatcgtgctcaagcgcgatttcacc
gaaggcggtgacgtcaaggctggccagcgtctgtacaagatcgatccggcaacgtatcag
gccgcttacgagaatgccaaggcaacgctcgcaaaggctgtggcgaatcaggcgtcgacc
aagctgttggccgatcgctacaagcaactggtcgccgtcgaagccgtgtcgaagcaggac
tacgacaatgcggtcgccgctgcactgcaagccgacgccgatgtgcaagccggtaaggct
gccgtcgatacggcgaagatcaacctcggctacaccgacgtgccggctccgatctcgggc
cgcaccggtctgtcgcaagtgaccgaaggcgcttacgtgcagtccggcgccgctacgctc
atgacgaccgtgcagcagatcgatccgatgtacgtggacgtgacgcaatcggccgccgac
ggcctgcgtctgcgtcgcgcgctggccgacggcaagctgcaaagcgccggcaagaacgct
gccaaggtcgaactgacgctggaagacggcacgaagtacccgctcgaaggcaagctccag
ttctcggacatcaccgtcgaccagacgaccggctcggtgaccgtgcgtgccatcttcccg
aacccgaaccgcgagttgctgcccggcatgttcgtacacgccaagctccaggaaggcgtg
aaggacggcggtctgctggtgccgcaacaaggcgtgacgcgcgaccagaagggtcagccg
acggcactcatcgtgaacaaggaaggcaagatcgaactgcgtcagctcgtgaccgaccgt
gcgatcggcgacaagtggctggtgagctcgggtcttgccgcaggcgatcaggtgatcgtg
tcgggtcttcagaaggcgcgccccggttcgcctgcgaaggccgtgccggcacagttgccg
ggtgctcaggcgcaacagccggcaggtgcgagcgcaccggccgctgccagcgcttcgggt
gcctcgcaggccgacgccgcctcgagcgccaaagcccaataa
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