Pandoraea commovens: NTU39_20365
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Entry
NTU39_20365 CDS
T08365
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18095
multidrug efflux pump
Organism
pcom
Pandoraea commovens
Pathway
pcom01501
beta-Lactam resistance
pcom02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NTU39_20365
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NTU39_20365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcom02000
]
NTU39_20365
01504 Antimicrobial resistance genes [BR:
pcom01504
]
NTU39_20365
Transporters [BR:
pcom02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NTU39_20365
Antimicrobial resistance genes [BR:
pcom01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
NTU39_20365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UVA78394
LinkDB
All DBs
Position
complement(4525569..4528721)
Genome browser
AA seq
1050 aa
AA seq
DB search
MARFFIDRPVFAWVISLMITLVGLLAIRALPVAQYPDIAPPMVSVYSSYPGASAKVVEDS
VTAIIERQMNGAPGLMYTSATSGNGESSVNLTFRQGTSLDLAAVEVQNRLKTVESRLPEV
VRRYGVKVERAADNIHMVVTLSSRNPAIGEFDLGELAASQVVNQLKRVPGVGQVQFWGTE
KAIRIWPDPARLVALDLTASDIVSKVRAYNARVTVGDLGAGSTPTSAPINANVVSDTTYS
TPEQFASIPLRVRADGSAIRLGDVARVELGASDYNYSSRVDGLPATAMGIKLAAGSNAVE
VMKAVRAVMDEQAKLFPAGVEYQMPYETASFVKVSIQKVVKTLLEAIVLVFIVMYLFMQN
LRATLIPTLVVPVALLGTFGVLLGLGYSVNTLTMFGMVLAIGILVDDAIVVVENTERIMV
EEGLSPYAATVKAMKQISGAIIGITVVLVMVFIPMAFFSGAVGNIYRQFAVTLAVSISFS
AFLALSLTPALCATLLRPVAHDHHEKRGFFGWFNRTFAMGTERYTRRVDKTLRHPWRSML
VYGAILIAVPLAFMRLPSAFVPEEDTGSFMVMASEPQGATLPEAMTALKRIESYLMQNEP
VKHVFVLGGWNEFGAGPGGGMLYVTLKDWHERTSKHDGVNAIVERVNAKFTGQPDRMMIA
MNSPALPELGSSNGFNLRLQDRAGVGTEVFTAARDELLQKAAKDPVLKNVIFAGQGEVPQ
IDIAIDRRKMEALKVNMDDVNTTLATMFGSEYVGDFMLGAENRRVVVQSDGRQRVSPEDI
GNLRVRNASGEMVPLSSFVTLKWKLGSPQLKRYNGYPSFTLQGESAPGKSSGEAMARMEQ
LMSEMPAGIGHEWSGQSLEERASGAQAPILFALSVLVVFLALAALYESWAIPAAVIMVVP
LGVIGALGAVSLMGMPNDIYFKVGLIATIGLSAKNAILIVEVANDLAKQGMTWFDAAVEA
ARLRLRPIVMTSLAFGFGVVPLAIATGPASGAQRAIGVAVLGGIVTATVLAIFLVPLFFL
LVGRFVRRSHPGKDAPHDANDAAPAVEGKV
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtttctttatcgatcgcccggtttttgcctgggtgatctctctgatgattacg
ctcgtcggcctgctggccattcgggcgctacccgtcgcgcagtaccctgacatcgctccg
ccgatggtcagcgtatacagcagctacccgggcgcttcggcgaaggtcgtcgaagactcg
gtcacggccatcatcgaacgtcagatgaacggtgcgccggggctgatgtacacgtcggcc
acgagcggtaacggtgagtcgtcggtcaacctcacgttccgtcagggcactagtctcgat
ctggccgccgtggaagtgcagaaccggctgaagacggttgagtcacgcttgccggaagtc
gtgcgccgctacggcgtgaaggtcgaacgtgcggccgacaacatccacatggtggtgaca
ctgtcgtcgcgcaatccggccatcggcgagttcgatctgggtgagttggcggcgtcgcag
gtcgtcaaccagctcaagcgcgtgcctggcgtcggtcaggtgcagttctgggggacggag
aaggccattcgcatctggcccgacccggccagactcgtcgcgctcgatctcaccgcctcg
gacatcgtgtccaaggtgcgcgcctacaacgcgcgtgtgacggtcggcgatctcggcgct
ggctcgacgccgacgtccgcaccgatcaacgctaacgtcgtctccgacaccacctattcg
acgccggagcagttcgccagcattccgttgcgcgtgcgcgccgacggttcggccatccgg
ctgggtgacgtcgcgcgcgtggaactgggtgcgtcggactacaactattcgtcgcgcgtc
gacgggcttccggccaccgcgatgggtatcaagctcgcggcaggctcgaacgccgtcgaa
gtgatgaaggccgtgcgcgctgtgatggacgaacaggcaaagctgttcccggcaggcgtc
gaataccagatgccctacgagacggcgtcgttcgtgaaggtgtcgatccagaaggtcgtg
aagacgctgctcgaagccatcgtgctcgtgttcatcgtgatgtacctgttcatgcagaac
ctgcgtgcgacgctgatcccgacgctcgtcgtgccggtggcgttgctgggtacgttcggt
gtattgctgggcctcggatactccgtcaacacactcacgatgttcggcatggtgctggcc
atcggcattctggtggacgatgccatcgtcgtggtggagaacaccgagcggatcatggtc
gaggaggggttatccccgtacgcggcgacggtcaaggcgatgaagcagatcagcggcgcc
atcatcggcattacggtggtgctggtgatggtgttcattccgatggcgttcttctcgggc
gcggtgggcaacatctaccggcagttcgcggtcacgctcgcggtgtcgatcagcttctcg
gcattcctcgcactctcgttgacaccggcgctgtgcgcaacgttgctgcgcccggtggcg
cacgaccaccacgagaagcgcggcttcttcggctggttcaaccgtaccttcgcgatgggc
accgagcgctacacgcgccgggtcgacaagacgctgcgccatccgtggcgctcgatgctg
gtgtacggcgcgattctgatcgcggtgccgctggcgttcatgcgtctgccgtcggccttc
gtgcctgaggaagacaccggcagcttcatggtgatggcctccgagccgcaaggcgcaacg
ttgcccgaggcgatgacggcactcaagcgcatcgagagctatctgatgcagaacgagccg
gtcaagcacgtgttcgtgttgggtggctggaacgaattcggcgcgggccccggcggcggc
atgttgtacgtcacgctcaaggactggcacgagcgcacgtcgaagcatgacggcgtgaac
gccatcgtcgagcgcgtgaacgcgaagttcaccggccagccggatcgcatgatgatcgcg
atgaacagcccggcgctgccggaactcggttcgtcgaacggcttcaatctgcgcttgcag
gatcgtgcaggtgtcggcacggaagtgtttaccgccgcgcgcgacgagttgctgcaaaag
gcggccaaggatcccgtgctcaagaacgtgatctttgccgggcagggcgaggtgccgcag
atcgacatcgcgatcgaccgtcgcaagatggaagcgctcaaggtcaacatggacgacgtg
aacaccacgctcgccaccatgttcggctcggagtatgtcggcgacttcatgctgggtgcc
gagaatcgtcgcgtcgtcgtgcagtcggacgggcgtcagcgcgtgtcgccggaggatatc
ggcaatctgcgcgtgcgaaatgccagtggcgagatggtgccgttatcgtcgttcgtcacg
ctcaagtggaagctcggctcgccgcagttaaagcgctataacggctatccgtcgttcacg
cttcagggcgaatcggcgccgggcaagagcagcggcgaagccatggcgcgcatggagcaa
ctgatgtcggagatgcctgcgggcatcgggcacgagtggagcggtcagtcgcttgaagag
cgggcgtcgggcgcgcaggcaccgatcctgttcgcgctgtcggtgctcgtggtgttcctc
gcgctcgcggcgctctacgagagctgggcgattccggcggcggtcatcatggtggtgccg
ctcggcgtgatcggcgcactcggtgccgtgagtctgatgggcatgcccaacgacatctat
ttcaaggtgggcctgatcgcgaccatcggtctgtcggcgaagaacgccattctgattgtg
gaagtggccaacgatctcgcgaagcagggcatgacatggttcgatgcggcagtggaagcc
gcgcgactgcgcttgcgtccgatcgtgatgacgtcgctggcgttcggcttcggcgtggtg
ccgctggcgattgcgaccggcccggcgtcgggggcgcagcgcgcgatcggtgtggccgtg
ctgggcgggatcgtgacggccacggtgctggcgatcttcctggtgccgttgtttttcctg
ctggtgggccgcttcgtgcgccgctcgcatccgggtaaggatgcgccgcacgacgcgaat
gatgccgcaccggccgtagaggggaaggtatga
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