KEGG   Paracoccus contaminans: B0A89_01655
Entry
B0A89_01655       CDS       T04876                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
pcon  Paracoccus contaminans
Pathway
pcon03030  DNA replication
pcon03410  Base excision repair
pcon03420  Nucleotide excision repair
pcon03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcon00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B0A89_01655
   03410 Base excision repair
    B0A89_01655
   03420 Nucleotide excision repair
    B0A89_01655
   03430 Mismatch repair
    B0A89_01655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcon03032]
    B0A89_01655
   03400 DNA repair and recombination proteins [BR:pcon03400]
    B0A89_01655
Enzymes [BR:pcon01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     B0A89_01655
DNA replication proteins [BR:pcon03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     B0A89_01655
DNA repair and recombination proteins [BR:pcon03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     B0A89_01655
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B0A89_01655
   MMR (mismatch excision repair)
    DNA ligase
     B0A89_01655
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      B0A89_01655
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD Nlig-Ia 5_3_exonuc PTCB-BRCT Zn_ribbon_NUD
Other DBs
NCBI-ProteinID: ARJ68539
UniProt: A0A1W6CUR1
LinkDB
Position
complement(337767..340007)
AA seq 746 aa
MASRGTTADGGGGGVPAAEAAALRARLEAANLAYHRDDAPIMSDAEYDALKRRLAALETA
DPALASLDSPTQKVGATPSEKFAKVRHAQRMMSLENAFSADDVAEFAARIRSFLNLPGDA
PLAFTAEPKIDGLSLSLRYQGGRLVQAATRGDGTTGENVTANALTIADIPQVLDGAPDTL
EVRGEVYMSHADFAALNAEGADRVFANPRNAAAGSLRQLDSAITARRPLRFFAYGWGALS
APLADTQSGAIARLAALGFPTTQPRLCAGLDGLLAYWAETEQRRATLGYDIDGVVYKVDD
LALQARLGFRATTPRWALAHKFPAELAWTTLERIEIQVGRTGALSPVARLSPVTVGGVVV
SNATLHNEDYIAGRDSRGQPIREGRDIRPGDWVQVYRAGDVIPKIADVDLSRRTDPEPYA
FPMTCPECGSEAIREPGDSVRRCTAGLGCPAQAIERLRHFVSRAAFDIEGLGAKQIEAFF
ADAALPVREPADIFTLAERDAAGFARLGNRHGWGERSADNLFRAIDERRSIPLARLIFAL
GIRHVGEVAAATLARHYGTWDAFVAAMDAAAPAAARHRAADEAETAERADAAAAGRRAAV
KAARDAAWAAVPLPEGARAAWDALTGIEGIGAVLAESLVASFAQPAERGAIDRLLAHLTV
QPATALVRAGSAIAGLTVVFTGTLERMTRAEAKARAEALGAKVAGSVSARTDLLIAGPGA
GSKAARAAELGIRVIDEDEWLSIAQG
NT seq 2241 nt   +upstreamnt  +downstreamnt
atggcatcgcggggcaccacggcggatggcgggggcggcggggttcctgcggccgaggcg
gcggcgctgcgcgcccggcttgaggcggcaaacctcgcctatcaccgcgacgatgcgccg
atcatgagcgatgccgaatacgacgcgctcaagcgccggctcgccgcgctcgagacggcc
gacccggcgctggcaagcctggacagccccacgcagaaggtcggggccacgccgtcggaa
aaattcgccaaggtgcggcacgcccagcggatgatgtcgctggaaaacgccttttccgcc
gatgacgtggccgagtttgcagcccgcatccgcagctttctgaacctgcccggcgatgcc
cccctggcctttaccgccgagcccaagatcgacggtctgtcgctgtcgctgcgctatcag
ggggggcggctggtgcaggcggccacgcgcggggacggcacgacgggcgagaacgtgacc
gccaatgccttgacgattgccgacatcccgcaggtgctggacggcgcgcccgatacgctc
gaggtgcggggcgaggtctatatgtcacatgccgatttcgccgccctgaacgccgaaggg
gccgatcgggtctttgccaacccgcgcaacgcagccgccggctcgttgcgccagctggac
tcggcgatcaccgcgcgccggccgctgcgctttttcgcctatggctggggggcgctgtcc
gcgccgctggccgatacgcagtcgggcgcgatcgcgcggctggcggcgctgggctttccg
acgacgcagccgcggctgtgcgccgggcttgacggcctgctggcctattgggccgaaacc
gaacagcgccgcgcgacgctgggctatgacatcgacggggtcgtctacaaggttgacgac
ctggcgttgcaggcgcggcttggctttcgtgccaccacgccccgctgggcgctggcgcac
aagtttccggccgaactggcctggacgacgcttgagcggatcgagatccaggtcggccgc
accggcgcgctgtcccccgtggcgcggctgtcgcccgtcacggtggggggcgtcgtggtc
tccaacgccacgttgcacaacgaggattacatcgccggccgcgacagccgcggccagccg
atccgcgaggggcgcgacatccggcccggcgactgggtgcaggtctatcgcgccggggac
gtgatccccaagatcgccgatgtggacctgtcgcggcgcaccgatcccgaaccctatgcc
tttcccatgacctgccccgaatgcggcagcgaggcgatccgcgagccgggcgattccgtg
cgccgctgcaccgcggggctgggctgccccgcccaggcgatcgagcggctgcgccatttc
gtatcccgcgccgcctttgacatcgaggggctgggcgcgaagcagatcgaggcattcttt
gccgacgcggccttgccggtgcgcgagccggccgacatcttcaccctggccgaacgcgat
gcggcaggctttgcccgcctgggcaaccgccacggctggggcgagcggtccgccgacaac
ctgttccgcgccatcgacgagcggcggtccatcccgctggcgcggctgatctttgcgctg
ggcatccgccatgtgggcgaggtggcggccgcaacgctcgcccgccattacggcacatgg
gatgccttcgtcgctgccatggacgccgccgcacccgcggccgcgcgccaccgtgccgcc
gacgaggccgagacggccgagcgtgccgatgccgccgcggcggggcggcgggcggccgtc
aaggccgcccgcgatgcggcctgggccgcggtccccttgcccgagggcgcccgcgccgct
tgggacgccctgaccggcatcgaggggatcggggcggtgctggccgaatcgctggtcgcc
agttttgcccagccggccgaacgcggggccatcgaccgcctgctggcccatctgaccgtc
cagcccgccaccgccctggtcagggcgggcagcgccatcgcgggcctgaccgtggtgttc
accggcaccctggaacggatgacccgcgccgaggccaaggcccgcgccgaggcgctgggg
gccaaggtggcggggtcggtttccgccaggaccgatctgctcatcgccggccccggcgcg
gggtccaaggcggcaagggccgccgaactgggcatccgcgtgatcgacgaggacgaatgg
ctgtcgatcgcgcagggctag

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