Puma concolor (puma): 112853970
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Entry
112853970 CDS
T08890
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112853970 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoo03041
]
112853970 (EFTUD2)
Spliceosome [BR:
pcoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112853970 (EFTUD2)
Complex C
U5 SnRNP specific factors
112853970 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
GTP_EFTU_D2
EFG_III
EFG_IV
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
112853970
NCBI-ProteinID:
XP_025773196
UniProt:
A0A6P6HD30
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKPVDMHQNRSSVINPPISFPVIRNVKFKILDAVVAQEPL
HRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDA
PIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPL
EPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggataccgacttatatgacgagtttggaaattatattggaccagagcttgattctgat
gaagatgatgatgaactgggcagagagaccaaagatcttgatgagatggatgatgacgat
gatgacgatgatgtaggagatcacgatgaggaccaccctggaatggaggtggtgctgcac
gaggacaagaagtactaccccacagctgaggaggtgtatggtcctgaggtggagaccatc
gtgcaagaggaagacacccagcctctcaccgaacctataattaagccggtgaaaaccaag
aagttcactctgatggagcagactttacctgtcacggtgtatgaaatggacttcttggca
gatttgatggataactcggagctcatcagaaatgtgaccctctgtggccatctccaccat
ggcaagacatgttttgtagattgtttaatagagcagactcacccggaaatcaggaagcgc
tatgaccaagatctgtgctacactgacatcctcttcacagagcaggagagaggtgttggc
atcaaaagcactccagtgacagtggtcttgccagataccaaaggaaagtcttacctcttc
aatatcatggacactccaggacatgtgaatttttctgatgaggtcacagctggcttgcgc
atctcagatggagttgtccttttcatcgatgcggctgaaggggtgatgctaaacacagag
cggctgatcaagcacgcagtacaggagaggctggcggtcaccgtgtgcatcaacaagatt
gaccggctgatcctggagctaaagctgcctccaactgatgcttattataagctgcgccac
atcgtagatgaggtcaacggattaataagcatgtactccaccgatgagaacctgatcctt
tccccactcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacactc
ggctcctttgccaagatctatgctgacaccttcggtgacattaactaccaggaatttgct
aaaagactctggggtgacatctacttcaaccccaaaacacgaaaattcacaaaaaaggcc
ccaaccagcagctcccagaggagctttgtggagtttatcttggagcctctgtataagatc
cttgctcaggttgtgggtgacgtggacaccagcctccccaggaccctggatgagcttggc
attcatctgaccaaagaagagcttaagctgaatatccgccccctgctcaggctggtctgc
aaaaaattctttggtgaattcacaggctttgtggacatgtgtgtgcagcatatcccctct
ccaaaggtgggcgccaagcccaagattgagcacacctacactggcggtgtggattctgat
ctcggcgaggccatgagcgactgtgatcctgacggtcccctgatgtgccacaccaccaag
atgtacagcacggatgatggagttcagtttcatgcctttggccgggtgctgagtggcacc
atccatgctgggcagcccgtgaaggtgctgggggagaactacaccctggaggatgaggaa
gactcccagatatgcaccgtgggtcgtctttggatctctgtggccaggtaccacattgag
gtgaaccgtgttcctgctggcaactgggttctgatcgaaggtgttgatcaaccaattgtg
aagacagcaaccataactgaaccccgaggcaatgaggaggctcagattttccgccccttg
aagttcaacaccacatccgttatcaagattgctgtggaaccagtcaacccctcagagcta
cccaagatgctggacggtctgcgcaaggtcaacaagagctatccatccctcaccaccaag
gtggaagagtctggagagcacgtgattctgggtactggggagctgtacctcgactgtgtg
atgcacgatttacggaagatgtactcagagatcgacatcaaggtggctgatcccgttgtc
acgttttgtgagacggtggtggagacatcttccctcaagtgctttgctgaaacgcccaat
aagaagcctgtagacatgcaccagaaccgctcctcagtcatcaacccccccatctccttt
ccagtgattcgaaatgtcaagtttaagatcctggatgcagtggttgcccaagagcccttg
caccggggcgggggccaaatcatccccacggccaggagagttgtctattctgccttcctc
atggccactcctcgtctgatggagccttactacttcgtggaggtccaggcccctgcagat
tgtgtctctgctgtgtatactgtcctggccaggcgcagggggcatgtgactcaggatgca
cccatcccaggctcccctctctacaccatcaaagctttcatccccgccattgactctttt
ggctttgagaccgatctgcggactcacacccaggggcaggccttttccttgtctgtcttc
caccattggcagattgtgcccggtgatcctctggacaagagcattgtcatccgtcccctg
gagccacaaccagctcctcacctggcccgagaattcatgatcaaaacccgtcgcaggaag
ggactgagtgaggatgtgagcatcagcaagttctttgatgatcctatgttgctggagctc
gccaagcaggatgttgtgctcaattaccccatgtga
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