Puma concolor (puma): 112864196
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Entry
112864196 CDS
T08890
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo04064
NF-kappa B signaling pathway
pcoo04622
RIG-I-like receptor signaling pathway
pcoo04623
Cytosolic DNA-sensing pathway
pcoo05160
Hepatitis C
pcoo05161
Hepatitis B
pcoo05162
Measles
pcoo05164
Influenza A
pcoo05168
Herpes simplex virus 1 infection
pcoo05169
Epstein-Barr virus infection
pcoo05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
112864196 (DDX58)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
112864196 (DDX58)
04623 Cytosolic DNA-sensing pathway
112864196 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
112864196 (DDX58)
05160 Hepatitis C
112864196 (DDX58)
05171 Coronavirus disease - COVID-19
112864196 (DDX58)
05164 Influenza A
112864196 (DDX58)
05162 Measles
112864196 (DDX58)
05168 Herpes simplex virus 1 infection
112864196 (DDX58)
05169 Epstein-Barr virus infection
112864196 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pcoo04054
]
112864196 (DDX58)
Enzymes [BR:
pcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112864196 (DDX58)
Pattern recognition receptors [BR:
pcoo04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
112864196 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_22
AAA_25
CCDC85
Motif
Other DBs
NCBI-GeneID:
112864196
NCBI-ProteinID:
XP_025783080
UniProt:
A0A6P6I4R3
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MTAEERRNLRAFQDYVIKILDPTYILSYMSPWFKDDEVQYIRAEKNNKGTMEAASLFLKF
LLELQEEGWFRGFLDALAHAGYSGLYEAIESWDFQTIERLEEYRSLLKRLQPEFKTTVNP
KDILPEVSKCLISQECEEIIQVCSNKGLMAGAEKMVECFLRSDKENWPKTLKLALDKEES
KFSELWTVDKGAKNIDVKVLEDDEMETSDIQIFYKEESECQNLSQNSCPSSEVSHIYTPV
KPRNYQLELALPAKEGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAVQLP
VYEQQKSVFSNYFERLGYKVAGVSGATSENVSVKQIVENNDIIILTPQILVNSLKNGTIP
SLSVFTLMIFDECHNTGKHHPYNMIMFNYLDQKLGGSSDPLPQVIGLTASVGIGDAKSTA
EAVEYICRLCASLDTSVIATVKDNLEELEEIVYKPQKFFRKVESRTTDRFKCIISQLMRE
TESLAKSIFDEIEGISQIRNREFGTQKYEQWIVTVQKACTVFQLPDKDEESRICKALFLY
TSHLRKYNDALIINEHARMKDALDYLKDFFTNVRAAGFDEIEQDLTRRFEEKLQKLESVS
MDPSNENPKLKDLCFILQEEYHLNPESRTILFVKTRALVDALKKWIEENSELSFLKPGIL
TGRGKTNQNTGMTLPAQKCALDAFRTNGDKKILIATSVADEGIDIAECNLVILYEYVGNV
IKMIQTRGRGRARGSKCFLLTSNAVVIEKEKINIYKEKMMNDSISMLQTWNEAVFKEKVL
QIQIQEKVIRDSQGKVEPVPDKENKKLLCRKCKAFACYTVDIRVVEECHYTVVGDAFRKC
FVSKLHPKPKSFGYFEKRAKIFCARPNCSHDWGIHVKYKIFEIPVIKIESFVVEDIATGA
QKLYAKWKDFHFEKIPFDAKEMPK
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggaggagaggaggaatctgcgcgccttccaggactatgtcatcaagattctg
gaccctacctatatcctgagctacatgtcgccctggtttaaggacgatgaggtgcagtat
attcgggctgagaaaaacaataagggcacgatggaggctgcctcactttttcttaagttc
ctattggagctccaggaagaaggctggttccgtggctttttggatgcccttgctcatgca
ggttattctggactttatgaagccattgaaagttgggatttccaaaccattgaaaggttg
gaggaatataggtcactgttaaagcgtttacaaccagaatttaaaactacagttaatcca
aaagatatccttcctgaagtatctaaatgtttaattagtcaggaatgtgaagaaattatt
caggtttgttccaacaaggggctgatggcaggtgcagagaaaatggttgaatgctttctc
agatcggacaaggaaaactggcccaaaactttgaaacttgctttggacaaagaagagagc
aagttcagtgaactgtggactgtggacaaaggtgcaaagaatattgacgtgaaagttctt
gaggatgatgaaatggaaacttctgacatacagattttctacaaggaagaatctgaatgc
cagaatcttagtcagaattcatgtccatcttcagaagtctctcatatttacaccccagtg
aagccaagaaattaccaactagagcttgctttgcctgctaaggaaggaaaaaacacaata
atatgtgctcctactggttgtggaaaaacctttgtttcacttcttatatgtgagcatcat
cttaaaaaatttccgcaaggacaaaaagggaaggttgtcttttttgctgttcaactccca
gtgtatgaacagcagaaatctgtgttctcaaactattttgaaagacttgggtacaaagtt
gcaggtgtttctggagcaacgtctgagaatgtctcagtgaaacagattgttgagaacaat
gacatcatcattttaactccacagattcttgtgaatagtcttaaaaatgggactattcca
tcactctctgtctttactttgatgatatttgatgaatgtcacaatactggtaaacaccat
ccttataatatgatcatgtttaattatctagatcagaaacttggaggatcttcagaccca
ctgcctcaggtcattgggctgactgcctcggttggcattggggatgccaaaagcacagca
gaagccgtggaatatatctgcagactgtgtgcttctcttgacacatcagtgatagcaaca
gtcaaagacaacttggaggaactggaagaaattgtttataagccccaaaagtttttcagg
aaagtggaatcacggaccactgacagatttaaatgcatcatctctcagctgatgagggaa
acagagagtctggcaaagagtatctttgacgaaatcgaaggtatatctcaaattcgaaat
cgggaatttggaacgcagaaatatgaacaatggatcgttactgttcagaaagcatgcacg
gtgtttcagttgcctgacaaagatgaagagagcaggatttgtaaagcactgtttttgtac
acttcccatttgcggaaatataacgatgccctcattatcaatgagcatgcgcgaatgaaa
gatgctctggattacttgaaagacttcttcaccaacgtccgagcggcaggatttgatgag
attgagcaagatctcactcggagattcgaagaaaagctgcagaaactggaaagcgtttct
atggatcccagcaatgagaacccaaaactcaaagatctctgcttcatcttgcaagaggag
taccacttaaacccagagagtagaaccatcctctttgtgaaaaccagagcacttgtggat
gctttgaagaaatggattgaagaaaattctgaactcagctttctaaaacctggcatattg
actggacggggcaaaacaaatcagaacacagggatgacactcccagcacagaagtgtgca
ttggatgcattcagaactaatggagataaaaagattctgatcgccacctcagttgctgat
gaaggcattgacattgctgagtgcaatttggtcatcctgtatgagtatgtgggcaatgtc
atcaaaatgatccaaactagaggcagaggaagagcgagaggtagcaagtgcttccttctg
actagtaatgctgttgtaattgaaaaagaaaaaataaacatatacaaagaaaaaatgatg
aacgactccatttcaatgcttcagacatggaatgaagcagtatttaaagaaaaggttctc
cagatacagattcaagaaaaagtcatcagggatagtcaaggaaaagtagaacctgtacct
gataaggaaaataaaaaactgctctgcagaaagtgcaaagcctttgcatgttacactgtt
gatatcagagtggtggaggaatgccattacactgtggttggagatgctttcaggaagtgc
tttgtgagtaaactacaccccaaaccaaagagctttggatattttgagaagagagcaaag
atcttctgtgccagaccaaactgcagccatgactggggaatccatgtgaagtataagata
tttgagattccagttataaaaatagaaagttttgtggtggaggatattgcaactggagct
cagaaactatatgcaaagtggaaggactttcattttgagaagataccatttgatgctaag
gaaatgcccaaatga
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